Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXP3Q9BZS1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 MROH4P-201ENST00000431302 1578 ntBASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 DUX4L27-201ENST00000554796 1261 ntBASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 AL135744.1-201ENST00000565098 629 ntBASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 AC127383.1-201ENST00000444697 1800 ntBASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 AGAP7P-201ENST00000582299 2062 ntBASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 AGAP14-201ENST00000624701 2060 ntBASIC16.3■□□□□ 0.2
FOXP3Q9BZS1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 AC004987.2-201ENST00000395959 1148 ntBASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 KRT18P32-201ENST00000424695 1287 ntBASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 RN7SL589P-201ENST00000481268 310 ntBASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 AC073389.1-201ENST00000595595 795 ntBASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 BNIP3P1-202ENST00000550043 1585 ntBASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 AL136379.1-201ENST00000623471 2642 ntBASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXP3Q9BZS1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms