Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 CICP14-201ENST00000629111 2732 ntBASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AC211486.1-202ENST00000416371 468 ntBASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AC211476.1-201ENST00000503899 468 ntBASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AL512361.1-201ENST00000554200 418 ntBASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 MIR6080-201ENST00000617359 66 ntBASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 AC005912.2-201ENST00000619492 2400 ntBASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO3Q9BXY4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 AP006288.1-201ENST00000446065 395 ntBASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 HLA-J-203ENST00000494367 1087 ntBASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
RSPO3Q9BXY4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms