Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 PRYP6-201ENST00000514804 343 ntBASIC16.28■□□□□ 0.2
C9orf72Q96LT7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 AC105339.1-204ENST00000636249 355 ntBASIC16.28■□□□□ 0.2
C9orf72Q96LT7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf72Q96LT7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.27■□□□□ 0.2
C9orf72Q96LT7 CICP23-201ENST00000605013 2741 ntBASIC16.27■□□□□ 0.2
C9orf72Q96LT7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.27■□□□□ 0.2
C9orf72Q96LT7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 AC004835.2-201ENST00000603762 682 ntBASIC16.27■□□□□ 0.2
C9orf72Q96LT7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C9orf72Q96LT7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
C9orf72Q96LT7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 AC027612.4-201ENST00000605371 583 ntBASIC16.26■□□□□ 0.19
C9orf72Q96LT7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 AGAP7P-201ENST00000582299 2062 ntBASIC16.26■□□□□ 0.19
C9orf72Q96LT7 AGAP14-201ENST00000624701 2060 ntBASIC16.26■□□□□ 0.19
C9orf72Q96LT7 WASH6P-202ENST00000359512 1437 ntBASIC16.26■□□□□ 0.19
C9orf72Q96LT7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C9orf72Q96LT7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms