Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHAMP1Q96JM3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 RPL13AP23-201ENST00000480739 586 ntBASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 HNRNPUP1-201ENST00000554987 333 ntBASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 FER1L4-210ENST00000615531 5998 ntBASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC18.28■□□□□ 0.52
CHAMP1Q96JM3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 AC093909.1-201ENST00000504731 1122 ntBASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 AL135744.1-201ENST00000565098 629 ntBASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 RARRES2P8-201ENST00000566335 367 ntBASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.27■□□□□ 0.52
CHAMP1Q96JM3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms