Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS33AQ96AX1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 FOXO1B-201ENST00000504678 1527 ntBASIC15.19■□□□□ 0.02
VPS33AQ96AX1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 AL450487.1-201ENST00000426799 995 ntBASIC15.19■□□□□ 0.02
VPS33AQ96AX1 KRT18P2-201ENST00000447938 1258 ntBASIC15.19■□□□□ 0.02
VPS33AQ96AX1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 AC098859.1-201ENST00000502915 1238 ntBASIC15.19■□□□□ 0.02
VPS33AQ96AX1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 LINC00528-201ENST00000600723 2160 ntBASIC15.19■□□□□ 0.02
VPS33AQ96AX1 AC104581.4-201ENST00000623126 3052 ntBASIC15.19■□□□□ 0.02
VPS33AQ96AX1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VPS33AQ96AX1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 AC064836.3-201ENST00000607928 673 ntBASIC15.18■□□□□ 0.02
VPS33AQ96AX1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms