Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 RARRES2P5-201ENST00000564013 466 ntBASIC14.24□□□□□ -0.13
RTL6Q6ICC9 RRP7BP-205ENST00000566851 833 ntBASIC14.24□□□□□ -0.13
RTL6Q6ICC9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 AC008741.2-201ENST00000612792 3115 ntBASIC14.24□□□□□ -0.13
RTL6Q6ICC9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 KRT8P37-201ENST00000451609 1420 ntBASIC14.24□□□□□ -0.13
RTL6Q6ICC9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTL6Q6ICC9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AC079776.1-201ENST00000401540 1152 ntBASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 IGHV3-71-201ENST00000523324 359 ntBASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AC243562.2-201ENST00000561247 970 ntBASIC14.23□□□□□ -0.13
RTL6Q6ICC9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 TMEM261P1-201ENST00000604899 340 ntBASIC14.23□□□□□ -0.13
RTL6Q6ICC9 WFDC1-204ENST00000613603 549 ntBASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AL162274.1-201ENST00000617191 1098 ntBASIC14.23□□□□□ -0.13
RTL6Q6ICC9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 AL596087.1-201ENST00000400979 1969 ntBASIC14.23□□□□□ -0.13
RTL6Q6ICC9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.23□□□□□ -0.13
RTL6Q6ICC9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 BNIP3P1-202ENST00000550043 1585 ntBASIC14.22□□□□□ -0.13
RTL6Q6ICC9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTL6Q6ICC9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms