Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL512356.2-201ENST00000546955 174 ntBASIC12.76□□□□□ -0.37
CX3CL1P78423 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.76□□□□□ -0.37
CX3CL1P78423 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 MIR6080-201ENST00000617359 66 ntBASIC12.76□□□□□ -0.37
CX3CL1P78423 LINC00628-201ENST00000628516 1289 ntBASIC12.76□□□□□ -0.37
CX3CL1P78423 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 AP002414.2-201ENST00000591780 3365 ntBASIC12.76□□□□□ -0.37
CX3CL1P78423 AL136982.4-201ENST00000437689 1740 ntBASIC12.76□□□□□ -0.37
CX3CL1P78423 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.76□□□□□ -0.37
CX3CL1P78423 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.76□□□□□ -0.37
CX3CL1P78423 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.76□□□□□ -0.37
CX3CL1P78423 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CX3CL1P78423 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CX3CL1P78423 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CX3CL1P78423 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.75□□□□□ -0.37
CX3CL1P78423 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.75□□□□□ -0.37
CX3CL1P78423 TSEN15P1-201ENST00000423257 515 ntBASIC12.75□□□□□ -0.37
CX3CL1P78423 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.75□□□□□ -0.37
CX3CL1P78423 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.75□□□□□ -0.37
CX3CL1P78423 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.75□□□□□ -0.37
CX3CL1P78423 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.75□□□□□ -0.37
CX3CL1P78423 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 MIR4453-201ENST00000584019 89 ntBASIC12.75□□□□□ -0.37
CX3CL1P78423 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.75□□□□□ -0.37
CX3CL1P78423 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.75□□□□□ -0.37
CX3CL1P78423 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.75□□□□□ -0.37
CX3CL1P78423 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.75□□□□□ -0.37
CX3CL1P78423 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.75□□□□□ -0.37
CX3CL1P78423 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.75□□□□□ -0.37
CX3CL1P78423 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CX3CL1P78423 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CX3CL1P78423 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.75□□□□□ -0.37
CX3CL1P78423 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CX3CL1P78423 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.74□□□□□ -0.37
CX3CL1P78423 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CX3CL1P78423 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CL1P78423 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.74□□□□□ -0.37
CX3CL1P78423 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.74□□□□□ -0.37
CX3CL1P78423 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.74□□□□□ -0.37
CX3CL1P78423 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CL1P78423 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.74□□□□□ -0.37
CX3CL1P78423 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.74□□□□□ -0.37
CX3CL1P78423 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CL1P78423 BNIP3P1-202ENST00000550043 1585 ntBASIC12.74□□□□□ -0.37
CX3CL1P78423 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.74□□□□□ -0.37
CX3CL1P78423 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CL1P78423 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CL1P78423 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CL1P78423 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CL1P78423 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CL1P78423 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.74□□□□□ -0.37
CX3CL1P78423 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CL1P78423 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CX3CL1P78423 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms