Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.81□□□□□ -0.36
LMO4P61968 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
LMO4P61968 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO4P61968 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 MIR1908-201ENST00000410394 80 ntBASIC12.81□□□□□ -0.36
LMO4P61968 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LMO4P61968 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.81□□□□□ -0.36
LMO4P61968 AC022494.1-201ENST00000466044 728 ntBASIC12.81□□□□□ -0.36
LMO4P61968 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.81□□□□□ -0.36
LMO4P61968 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.81□□□□□ -0.36
LMO4P61968 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.81□□□□□ -0.36
LMO4P61968 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO4P61968 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.81□□□□□ -0.36
LMO4P61968 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO4P61968 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
LMO4P61968 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO4P61968 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO4P61968 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO4P61968 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO4P61968 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LMO4P61968 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LMO4P61968 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LMO4P61968 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO4P61968 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO4P61968 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LMO4P61968 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LMO4P61968 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
LMO4P61968 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO4P61968 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 AL355994.2-201ENST00000447882 704 ntBASIC12.8□□□□□ -0.36
LMO4P61968 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LMO4P61968 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.8□□□□□ -0.36
LMO4P61968 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.8□□□□□ -0.36
LMO4P61968 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LMO4P61968 MIR4538-201ENST00000581377 78 ntBASIC12.8□□□□□ -0.36
LMO4P61968 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 AC132938.4-201ENST00000623835 848 ntBASIC12.8□□□□□ -0.36
LMO4P61968 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO4P61968 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.8□□□□□ -0.36
LMO4P61968 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 KRT8P35-201ENST00000483942 1338 ntBASIC12.8□□□□□ -0.36
LMO4P61968 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO4P61968 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO4P61968 AC010491.1-201ENST00000563101 2797 ntBASIC12.8□□□□□ -0.36
LMO4P61968 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LMO4P61968 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LMO4P61968 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LMO4P61968 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO4P61968 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO4P61968 AL138709.1-201ENST00000614840 1693 ntBASIC12.8□□□□□ -0.36
LMO4P61968 AP003680.1-201ENST00000598970 3660 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms