Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EMP3P54852 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EMP3P54852 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.48■□□□□ 0.07
EMP3P54852 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EMP3P54852 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.48■□□□□ 0.07
EMP3P54852 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC15.48■□□□□ 0.07
EMP3P54852 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.48■□□□□ 0.07
EMP3P54852 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.48■□□□□ 0.07
EMP3P54852 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.48■□□□□ 0.07
EMP3P54852 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EMP3P54852 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EMP3P54852 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
EMP3P54852 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EMP3P54852 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
EMP3P54852 AC023157.3-201ENST00000619086 2088 ntBASIC15.48■□□□□ 0.07
EMP3P54852 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
EMP3P54852 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
EMP3P54852 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EMP3P54852 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EMP3P54852 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EMP3P54852 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.48■□□□□ 0.07
EMP3P54852 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.48■□□□□ 0.07
EMP3P54852 AL592424.1-201ENST00000563624 1536 ntBASIC15.48■□□□□ 0.07
EMP3P54852 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
EMP3P54852 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.47■□□□□ 0.07
EMP3P54852 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
EMP3P54852 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.47■□□□□ 0.07
EMP3P54852 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
EMP3P54852 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
EMP3P54852 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.47■□□□□ 0.07
EMP3P54852 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.47■□□□□ 0.07
EMP3P54852 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.47■□□□□ 0.07
EMP3P54852 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.47■□□□□ 0.07
EMP3P54852 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.47■□□□□ 0.07
EMP3P54852 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.47■□□□□ 0.07
EMP3P54852 EAF2-202ENST00000451944 960 ntTSL 2 BASIC15.47■□□□□ 0.07
EMP3P54852 MTND2P39-201ENST00000457230 764 ntBASIC15.47■□□□□ 0.07
EMP3P54852 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 AC125807.1-201ENST00000483097 614 ntBASIC15.47■□□□□ 0.07
EMP3P54852 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC15.47■□□□□ 0.07
EMP3P54852 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.47■□□□□ 0.07
EMP3P54852 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.47■□□□□ 0.07
EMP3P54852 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.47■□□□□ 0.07
EMP3P54852 MIR4453-201ENST00000584019 89 ntBASIC15.47■□□□□ 0.07
EMP3P54852 MIR4321-201ENST00000592276 80 ntBASIC15.47■□□□□ 0.07
EMP3P54852 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.47■□□□□ 0.07
EMP3P54852 AC026979.3-201ENST00000607315 403 ntBASIC15.47■□□□□ 0.07
EMP3P54852 AL158211.3-201ENST00000607385 239 ntBASIC15.47■□□□□ 0.07
EMP3P54852 AL021368.1-201ENST00000607490 540 ntBASIC15.47■□□□□ 0.07
EMP3P54852 AC097065.2-201ENST00000608159 533 ntBASIC15.47■□□□□ 0.07
EMP3P54852 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 AC023510.2-201ENST00000622162 746 ntBASIC15.47■□□□□ 0.07
EMP3P54852 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.47■□□□□ 0.07
EMP3P54852 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
EMP3P54852 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.47■□□□□ 0.07
EMP3P54852 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.47■□□□□ 0.07
EMP3P54852 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
EMP3P54852 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
EMP3P54852 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.47■□□□□ 0.07
EMP3P54852 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EMP3P54852 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.46■□□□□ 0.07
EMP3P54852 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.46■□□□□ 0.07
EMP3P54852 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.46■□□□□ 0.07
EMP3P54852 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.46■□□□□ 0.07
EMP3P54852 AL603832.2-201ENST00000566195 2125 ntBASIC15.46■□□□□ 0.07
EMP3P54852 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.46■□□□□ 0.07
EMP3P54852 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
EMP3P54852 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EMP3P54852 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
EMP3P54852 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
EMP3P54852 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms