Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
ATXN3P54252 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.18■□□□□ 0.18
ATXN3P54252 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ATXN3P54252 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATXN3P54252 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.18■□□□□ 0.18
ATXN3P54252 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.18■□□□□ 0.18
ATXN3P54252 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ATXN3P54252 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATXN3P54252 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ATXN3P54252 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ATXN3P54252 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.17■□□□□ 0.18
ATXN3P54252 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.17■□□□□ 0.18
ATXN3P54252 PRAL-201ENST00000624952 3286 ntBASIC16.17■□□□□ 0.18
ATXN3P54252 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATXN3P54252 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ATXN3P54252 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ATXN3P54252 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.17■□□□□ 0.18
ATXN3P54252 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.17■□□□□ 0.18
ATXN3P54252 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.17■□□□□ 0.18
ATXN3P54252 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.17■□□□□ 0.18
ATXN3P54252 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
ATXN3P54252 AC106886.1-201ENST00000568660 600 ntBASIC16.17■□□□□ 0.18
ATXN3P54252 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ATXN3P54252 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATXN3P54252 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.17■□□□□ 0.18
ATXN3P54252 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.17■□□□□ 0.18
ATXN3P54252 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ATXN3P54252 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.17■□□□□ 0.18
ATXN3P54252 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATXN3P54252 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATXN3P54252 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.16■□□□□ 0.18
ATXN3P54252 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.16■□□□□ 0.18
ATXN3P54252 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.16■□□□□ 0.18
ATXN3P54252 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ATXN3P54252 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.16■□□□□ 0.18
ATXN3P54252 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.16■□□□□ 0.18
ATXN3P54252 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 FOXO1B-201ENST00000504678 1527 ntBASIC16.16■□□□□ 0.18
ATXN3P54252 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.16■□□□□ 0.18
ATXN3P54252 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.16■□□□□ 0.18
ATXN3P54252 AC112492.5-201ENST00000421897 457 ntBASIC16.16■□□□□ 0.18
ATXN3P54252 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
ATXN3P54252 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.16■□□□□ 0.18
ATXN3P54252 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.16■□□□□ 0.18
ATXN3P54252 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ATXN3P54252 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.16■□□□□ 0.18
ATXN3P54252 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.16■□□□□ 0.18
ATXN3P54252 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.16■□□□□ 0.18
ATXN3P54252 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ATXN3P54252 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.16■□□□□ 0.18
ATXN3P54252 AC104640.1-201ENST00000562617 2109 ntBASIC16.16■□□□□ 0.18
ATXN3P54252 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.16■□□□□ 0.18
ATXN3P54252 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.16■□□□□ 0.18
ATXN3P54252 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.16■□□□□ 0.18
ATXN3P54252 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.16■□□□□ 0.18
ATXN3P54252 MST1L-201ENST00000442552 2185 ntBASIC16.16■□□□□ 0.18
ATXN3P54252 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATXN3P54252 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATXN3P54252 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms