Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TM4SF4P48230 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TM4SF4P48230 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TM4SF4P48230 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF4P48230 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF4P48230 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF4P48230 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF4P48230 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF4P48230 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF4P48230 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 MIR648-201ENST00000385046 94 ntBASIC17.56■□□□□ 0.4
TM4SF4P48230 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF4P48230 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF4P48230 FAM58BP-201ENST00000439056 645 ntBASIC17.56■□□□□ 0.4
TM4SF4P48230 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF4P48230 AC130709.1-201ENST00000484779 1212 ntBASIC17.56■□□□□ 0.4
TM4SF4P48230 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF4P48230 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF4P48230 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.56■□□□□ 0.4
TM4SF4P48230 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF4P48230 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF4P48230 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF4P48230 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.56■□□□□ 0.4
TM4SF4P48230 AC242376.2-201ENST00000619355 883 ntBASIC17.56■□□□□ 0.4
TM4SF4P48230 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF4P48230 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 NEFHP1-201ENST00000412845 2629 ntBASIC17.56■□□□□ 0.4
TM4SF4P48230 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TM4SF4P48230 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF4P48230 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF4P48230 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TM4SF4P48230 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF4P48230 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
TM4SF4P48230 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF4P48230 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.55■□□□□ 0.4
TM4SF4P48230 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF4P48230 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.55■□□□□ 0.4
TM4SF4P48230 DUX4L46-201ENST00000566845 751 ntBASIC17.55■□□□□ 0.4
TM4SF4P48230 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.55■□□□□ 0.4
TM4SF4P48230 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.55■□□□□ 0.4
TM4SF4P48230 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TM4SF4P48230 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.55■□□□□ 0.4
TM4SF4P48230 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.55■□□□□ 0.4
TM4SF4P48230 AC004466.1-201ENST00000599515 1080 ntBASIC17.55■□□□□ 0.4
TM4SF4P48230 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF4P48230 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TM4SF4P48230 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.55■□□□□ 0.4
TM4SF4P48230 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF4P48230 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TM4SF4P48230 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF4P48230 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TM4SF4P48230 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF4P48230 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
TM4SF4P48230 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF4P48230 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF4P48230 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF4P48230 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF4P48230 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TM4SF4P48230 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF4P48230 FKBP4P6-201ENST00000457486 1332 ntBASIC17.54■□□□□ 0.4
TM4SF4P48230 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF4P48230 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF4P48230 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF4P48230 IGHV3-37-201ENST00000518544 340 ntBASIC17.54■□□□□ 0.4
TM4SF4P48230 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF4P48230 AC026803.1-201ENST00000569130 274 ntBASIC17.54■□□□□ 0.4
TM4SF4P48230 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF4P48230 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.54■□□□□ 0.4
TM4SF4P48230 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF4P48230 AL645728.2-202ENST00000641679 227 ntBASIC17.54■□□□□ 0.4
TM4SF4P48230 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF4P48230 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms