Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
USP8P40818 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
USP8P40818 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.26■□□□□ 0.35
USP8P40818 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.26■□□□□ 0.35
USP8P40818 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.26■□□□□ 0.35
USP8P40818 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
USP8P40818 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.26■□□□□ 0.35
USP8P40818 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
USP8P40818 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP8P40818 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.25■□□□□ 0.35
USP8P40818 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.25■□□□□ 0.35
USP8P40818 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.25■□□□□ 0.35
USP8P40818 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.25■□□□□ 0.35
USP8P40818 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 AL691432.1-201ENST00000596308 1422 ntBASIC17.25■□□□□ 0.35
USP8P40818 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.25■□□□□ 0.35
USP8P40818 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.25■□□□□ 0.35
USP8P40818 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 AC211486.1-202ENST00000416371 468 ntBASIC17.25■□□□□ 0.35
USP8P40818 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.25■□□□□ 0.35
USP8P40818 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USP8P40818 AC211476.1-201ENST00000503899 468 ntBASIC17.25■□□□□ 0.35
USP8P40818 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
USP8P40818 YBX1P5-201ENST00000509441 847 ntBASIC17.25■□□□□ 0.35
USP8P40818 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.25■□□□□ 0.35
USP8P40818 AC243562.2-201ENST00000561247 970 ntBASIC17.25■□□□□ 0.35
USP8P40818 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.25■□□□□ 0.35
USP8P40818 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.25■□□□□ 0.35
USP8P40818 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.25■□□□□ 0.35
USP8P40818 AL513210.1-201ENST00000629608 234 ntBASIC17.25■□□□□ 0.35
USP8P40818 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP8P40818 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.24■□□□□ 0.35
USP8P40818 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.24■□□□□ 0.35
USP8P40818 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 AC011477.6-201ENST00000604980 1927 ntBASIC17.24■□□□□ 0.35
USP8P40818 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.24■□□□□ 0.35
USP8P40818 FAM58DP-201ENST00000428076 619 ntBASIC17.24■□□□□ 0.35
USP8P40818 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.24■□□□□ 0.35
USP8P40818 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.24■□□□□ 0.35
USP8P40818 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP8P40818 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
USP8P40818 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 AC018892.3-201ENST00000623986 2499 ntBASIC17.24■□□□□ 0.35
USP8P40818 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 AL136982.4-201ENST00000437689 1740 ntBASIC17.24■□□□□ 0.35
USP8P40818 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP8P40818 BNIP3P1-202ENST00000550043 1585 ntBASIC17.23■□□□□ 0.35
USP8P40818 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.23■□□□□ 0.35
USP8P40818 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP8P40818 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
USP8P40818 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
USP8P40818 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP8P40818 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP8P40818 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP8P40818 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
USP8P40818 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.23■□□□□ 0.35
USP8P40818 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP8P40818 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.23■□□□□ 0.35
USP8P40818 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
USP8P40818 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP8P40818 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.23■□□□□ 0.35
USP8P40818 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.23■□□□□ 0.35
USP8P40818 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP8P40818 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.23■□□□□ 0.35
USP8P40818 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.23■□□□□ 0.35
USP8P40818 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
USP8P40818 RARRES2P9-201ENST00000565168 469 ntBASIC17.23■□□□□ 0.35
USP8P40818 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms