Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 PTCHD3P3-201ENST00000403073 906 ntBASIC13.39□□□□□ -0.27
VAMP1P23763 IGHV3-47-201ENST00000425060 335 ntBASIC13.39□□□□□ -0.27
VAMP1P23763 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.39□□□□□ -0.27
VAMP1P23763 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.39□□□□□ -0.27
VAMP1P23763 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.39□□□□□ -0.27
VAMP1P23763 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.39□□□□□ -0.27
VAMP1P23763 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
VAMP1P23763 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.39□□□□□ -0.27
VAMP1P23763 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.39□□□□□ -0.27
VAMP1P23763 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.39□□□□□ -0.27
VAMP1P23763 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.39□□□□□ -0.27
VAMP1P23763 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VAMP1P23763 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.38□□□□□ -0.27
VAMP1P23763 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.38□□□□□ -0.27
VAMP1P23763 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 AC009090.5-201ENST00000624886 2285 ntBASIC13.38□□□□□ -0.27
VAMP1P23763 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
VAMP1P23763 AL022476.1-201ENST00000443063 2083 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.38□□□□□ -0.27
VAMP1P23763 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.38□□□□□ -0.27
VAMP1P23763 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
VAMP1P23763 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.38□□□□□ -0.27
VAMP1P23763 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.38□□□□□ -0.27
VAMP1P23763 DRAXINP1-201ENST00000437611 948 ntBASIC13.38□□□□□ -0.27
VAMP1P23763 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.38□□□□□ -0.27
VAMP1P23763 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.38□□□□□ -0.27
VAMP1P23763 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.38□□□□□ -0.27
VAMP1P23763 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 TPSP2-201ENST00000561760 610 ntBASIC13.38□□□□□ -0.27
VAMP1P23763 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
VAMP1P23763 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.38□□□□□ -0.27
VAMP1P23763 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VAMP1P23763 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
VAMP1P23763 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.38□□□□□ -0.27
VAMP1P23763 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.38□□□□□ -0.27
VAMP1P23763 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VAMP1P23763 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.38□□□□□ -0.27
VAMP1P23763 AP005117.1-201ENST00000584346 1413 ntBASIC13.38□□□□□ -0.27
VAMP1P23763 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
VAMP1P23763 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.37□□□□□ -0.27
VAMP1P23763 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
VAMP1P23763 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.37□□□□□ -0.27
VAMP1P23763 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 NUS1P2-201ENST00000417358 873 ntBASIC13.37□□□□□ -0.27
VAMP1P23763 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms