Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DOAP06340 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HLA-DOAP06340 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HLA-DOAP06340 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HLA-DOAP06340 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.46■□□□□ 0.54
HLA-DOAP06340 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
HLA-DOAP06340 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HLA-DOAP06340 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 CYP2T1P-202ENST00000641596 2535 ntBASIC18.45■□□□□ 0.54
HLA-DOAP06340 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 AC092933.1-201ENST00000393644 945 ntBASIC18.45■□□□□ 0.54
HLA-DOAP06340 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 AC022137.2-201ENST00000503482 481 ntBASIC18.45■□□□□ 0.54
HLA-DOAP06340 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DOAP06340 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DOAP06340 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 BNIP3P42-201ENST00000454982 569 ntBASIC18.44■□□□□ 0.54
HLA-DOAP06340 AC007551.1-201ENST00000457394 519 ntBASIC18.44■□□□□ 0.54
HLA-DOAP06340 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 BNIP3P29-201ENST00000598302 571 ntBASIC18.44■□□□□ 0.54
HLA-DOAP06340 AC011447.5-201ENST00000616168 564 ntBASIC18.44■□□□□ 0.54
HLA-DOAP06340 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HLA-DOAP06340 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DOAP06340 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HLA-DOAP06340 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HLA-DOAP06340 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DOAP06340 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HLA-DOAP06340 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DOAP06340 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DOAP06340 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DOAP06340 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DOAP06340 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DOAP06340 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DOAP06340 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DOAP06340 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
HLA-DOAP06340 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DOAP06340 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.43■□□□□ 0.54
HLA-DOAP06340 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DOAP06340 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DOAP06340 RPL7P3-201ENST00000441388 714 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms