Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 KRT18P27-201ENST00000427733 1299 ntBASIC13.62□□□□□ -0.23
HLA-DQB1P01920 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 MTHFR-210ENST00000641407 2387 ntBASIC13.62□□□□□ -0.23
HLA-DQB1P01920 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 AP001267.2-201ENST00000532619 2086 ntBASIC13.62□□□□□ -0.23
HLA-DQB1P01920 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQB1P01920 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 AC099521.3-201ENST00000624251 2938 ntBASIC13.61□□□□□ -0.23
HLA-DQB1P01920 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 AC073621.1-201ENST00000392730 636 ntBASIC13.61□□□□□ -0.23
HLA-DQB1P01920 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 AC008667.4-201ENST00000607370 168 ntBASIC13.61□□□□□ -0.23
HLA-DQB1P01920 ACTL9-202ENST00000612068 1252 ntBASIC13.61□□□□□ -0.23
HLA-DQB1P01920 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.61□□□□□ -0.23
HLA-DQB1P01920 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 MST1P2-201ENST00000457982 2291 ntBASIC13.61□□□□□ -0.23
HLA-DQB1P01920 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQB1P01920 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQB1P01920 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQB1P01920 AC068587.6-202ENST00000641839 5619 ntBASIC13.6□□□□□ -0.23
HLA-DQB1P01920 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQB1P01920 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQB1P01920 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQB1P01920 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DQB1P01920 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DQB1P01920 AL356585.2-201ENST00000625078 2396 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms