Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
KCNQ3O43525 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNQ3O43525 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.97■□□□□ 0.79
KCNQ3O43525 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.97■□□□□ 0.79
KCNQ3O43525 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
KCNQ3O43525 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.97■□□□□ 0.79
KCNQ3O43525 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.97■□□□□ 0.79
KCNQ3O43525 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.97■□□□□ 0.79
KCNQ3O43525 AL355994.2-201ENST00000447882 704 ntBASIC19.97■□□□□ 0.79
KCNQ3O43525 ZNF767P-206ENST00000513792 565 ntBASIC19.97■□□□□ 0.79
KCNQ3O43525 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 RN7SL219P-201ENST00000582872 296 ntBASIC19.97■□□□□ 0.79
KCNQ3O43525 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.97■□□□□ 0.79
KCNQ3O43525 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.97■□□□□ 0.79
KCNQ3O43525 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.97■□□□□ 0.79
KCNQ3O43525 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
KCNQ3O43525 AL391005.1-201ENST00000623953 2435 ntBASIC19.97■□□□□ 0.79
KCNQ3O43525 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
KCNQ3O43525 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.97■□□□□ 0.79
KCNQ3O43525 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
KCNQ3O43525 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
KCNQ3O43525 KRT8P35-201ENST00000483942 1338 ntBASIC19.97■□□□□ 0.79
KCNQ3O43525 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNQ3O43525 PCDHA1-201ENST00000378133 2726 ntBASIC19.96■□□□□ 0.79
KCNQ3O43525 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.96■□□□□ 0.79
KCNQ3O43525 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KCNQ3O43525 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
KCNQ3O43525 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KCNQ3O43525 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.96■□□□□ 0.79
KCNQ3O43525 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.96■□□□□ 0.79
KCNQ3O43525 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KCNQ3O43525 AC084364.1-201ENST00000551967 1556 ntBASIC19.96■□□□□ 0.79
KCNQ3O43525 AC006001.1-201ENST00000325130 474 ntBASIC19.96■□□□□ 0.79
KCNQ3O43525 KLF2P2-201ENST00000416807 1039 ntBASIC19.96■□□□□ 0.79
KCNQ3O43525 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.96■□□□□ 0.79
KCNQ3O43525 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
KCNQ3O43525 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.96■□□□□ 0.79
KCNQ3O43525 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.96■□□□□ 0.79
KCNQ3O43525 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.96■□□□□ 0.79
KCNQ3O43525 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.96■□□□□ 0.79
KCNQ3O43525 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.96■□□□□ 0.79
KCNQ3O43525 AC008687.7-202ENST00000637404 953 ntBASIC19.96■□□□□ 0.79
KCNQ3O43525 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
KCNQ3O43525 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KCNQ3O43525 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KCNQ3O43525 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.96■□□□□ 0.79
KCNQ3O43525 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.96■□□□□ 0.79
KCNQ3O43525 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
KCNQ3O43525 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
KCNQ3O43525 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
KCNQ3O43525 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
KCNQ3O43525 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
KCNQ3O43525 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
KCNQ3O43525 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
KCNQ3O43525 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
KCNQ3O43525 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.95■□□□□ 0.78
KCNQ3O43525 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.95■□□□□ 0.78
KCNQ3O43525 FAM21FP-201ENST00000426241 1131 ntBASIC19.95■□□□□ 0.78
KCNQ3O43525 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.95■□□□□ 0.78
KCNQ3O43525 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.95■□□□□ 0.78
KCNQ3O43525 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNQ3O43525 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KCNQ3O43525 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.95■□□□□ 0.78
KCNQ3O43525 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.95■□□□□ 0.78
KCNQ3O43525 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.95■□□□□ 0.78
KCNQ3O43525 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.95■□□□□ 0.78
KCNQ3O43525 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms