Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 AC018695.7-201ENST00000624587 2492 ntBASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 AC009486.1-201ENST00000569860 813 ntBASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 BTNL10-201ENST00000595971 695 ntBASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 AC093813.1-201ENST00000605066 256 ntBASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 MIR6805-201ENST00000615055 62 ntBASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.71■□□□□ 0.11
C1QTNF3-AMACRE9PGA6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC112504.1-201ENST00000623415 1841 ntBASIC15.71■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AL118508.1-201ENST00000613502 2345 ntBASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC026410.3-201ENST00000514280 936 ntBASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MIR6752-201ENST00000618442 71 ntBASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms