Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 CNN2P8-201ENST00000421872 913 ntBASIC13.71□□□□□ -0.21
MBD3L3A6NE82 FAM21FP-201ENST00000426241 1131 ntBASIC13.71□□□□□ -0.21
MBD3L3A6NE82 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 AL583810.1-201ENST00000553344 1045 ntBASIC13.71□□□□□ -0.21
MBD3L3A6NE82 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 AL645728.2-202ENST00000641679 227 ntBASIC13.71□□□□□ -0.21
MBD3L3A6NE82 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MBD3L3A6NE82 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
MBD3L3A6NE82 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MBD3L3A6NE82 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.71□□□□□ -0.22
MBD3L3A6NE82 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
MBD3L3A6NE82 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
MBD3L3A6NE82 AC084364.1-201ENST00000551967 1556 ntBASIC13.71□□□□□ -0.22
MBD3L3A6NE82 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
MBD3L3A6NE82 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MBD3L3A6NE82 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 TUBB1P2-201ENST00000422712 1306 ntBASIC13.7□□□□□ -0.22
MBD3L3A6NE82 TUBB1P1-201ENST00000503144 1300 ntBASIC13.7□□□□□ -0.22
MBD3L3A6NE82 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 ACTBP8-201ENST00000403258 1108 ntBASIC13.7□□□□□ -0.22
MBD3L3A6NE82 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 AC114812.1-204ENST00000449669 728 ntBASIC13.7□□□□□ -0.22
MBD3L3A6NE82 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 AL118508.1-201ENST00000613502 2345 ntBASIC13.7□□□□□ -0.22
MBD3L3A6NE82 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms