Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC12.16□□□□□ -0.46
CDC42SE1Q9NRR8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CDC42SE1Q9NRR8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CDC42SE1Q9NRR8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CDC42SE1Q9NRR8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CDC42SE1Q9NRR8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC42SE1Q9NRR8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CDC42SE1Q9NRR8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC42SE1Q9NRR8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC12.15□□□□□ -0.46
CDC42SE1Q9NRR8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC42SE1Q9NRR8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC42SE1Q9NRR8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC42SE1Q9NRR8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
CDC42SE1Q9NRR8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CDC42SE1Q9NRR8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC42SE1Q9NRR8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC12.15□□□□□ -0.47
CDC42SE1Q9NRR8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CDC42SE1Q9NRR8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE1Q9NRR8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE1Q9NRR8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
CDC42SE1Q9NRR8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 LINC00526-201ENST00000581067 1875 ntBASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC42SE1Q9NRR8 AL158211.5-201ENST00000623583 2518 ntBASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC42SE1Q9NRR8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms