Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.06■□□□□ 0.96
HMG20AQ9NP66 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HMG20AQ9NP66 AC233723.2-201ENST00000623798 2106 ntBASIC21.05■□□□□ 0.96
HMG20AQ9NP66 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.05■□□□□ 0.96
HMG20AQ9NP66 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20AQ9NP66 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20AQ9NP66 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.05■□□□□ 0.96
HMG20AQ9NP66 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20AQ9NP66 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.05■□□□□ 0.96
HMG20AQ9NP66 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20AQ9NP66 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20AQ9NP66 ABCB10P4-201ENST00000566803 2184 ntBASIC21.04■□□□□ 0.96
HMG20AQ9NP66 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20AQ9NP66 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
HMG20AQ9NP66 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20AQ9NP66 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20AQ9NP66 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20AQ9NP66 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20AQ9NP66 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.04■□□□□ 0.96
HMG20AQ9NP66 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20AQ9NP66 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20AQ9NP66 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20AQ9NP66 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HMG20AQ9NP66 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20AQ9NP66 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HMG20AQ9NP66 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20AQ9NP66 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20AQ9NP66 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20AQ9NP66 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HMG20AQ9NP66 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20AQ9NP66 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMG20AQ9NP66 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMG20AQ9NP66 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
HMG20AQ9NP66 DUX4L13-201ENST00000554103 1267 ntBASIC21.02■□□□□ 0.96
HMG20AQ9NP66 DUX4L15-201ENST00000611059 1267 ntBASIC21.02■□□□□ 0.96
HMG20AQ9NP66 DUX4L23-201ENST00000615195 1269 ntBASIC21.02■□□□□ 0.96
HMG20AQ9NP66 DUX4L24-201ENST00000617576 1269 ntBASIC21.02■□□□□ 0.96
HMG20AQ9NP66 DUX4L22-201ENST00000618238 1269 ntBASIC21.02■□□□□ 0.96
HMG20AQ9NP66 DUX4L20-201ENST00000619712 1269 ntBASIC21.02■□□□□ 0.96
HMG20AQ9NP66 DUX4L21-201ENST00000622058 1269 ntBASIC21.02■□□□□ 0.96
HMG20AQ9NP66 DUX4L10-201ENST00000622460 1267 ntBASIC21.02■□□□□ 0.96
HMG20AQ9NP66 DUX4L25-201ENST00000624915 1269 ntBASIC21.02■□□□□ 0.96
HMG20AQ9NP66 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
HMG20AQ9NP66 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMG20AQ9NP66 C1orf229-201ENST00000623686 2258 ntBASIC21.02■□□□□ 0.95
HMG20AQ9NP66 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HMG20AQ9NP66 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.01■□□□□ 0.95
HMG20AQ9NP66 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20AQ9NP66 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20AQ9NP66 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.01■□□□□ 0.95
HMG20AQ9NP66 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.01■□□□□ 0.95
HMG20AQ9NP66 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20AQ9NP66 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20AQ9NP66 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMG20AQ9NP66 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMG20AQ9NP66 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HMG20AQ9NP66 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMG20AQ9NP66 AC137767.1-201ENST00000602918 1920 ntBASIC21■□□□□ 0.95
HMG20AQ9NP66 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20AQ9NP66 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.99■□□□□ 0.95
HMG20AQ9NP66 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20AQ9NP66 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.99■□□□□ 0.95
HMG20AQ9NP66 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20AQ9NP66 DUX4L11-201ENST00000611504 1267 ntBASIC20.99■□□□□ 0.95
HMG20AQ9NP66 DUX4L12-201ENST00000614593 1267 ntBASIC20.99■□□□□ 0.95
HMG20AQ9NP66 DUX4L14-201ENST00000621227 1267 ntBASIC20.99■□□□□ 0.95
HMG20AQ9NP66 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HMG20AQ9NP66 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.99■□□□□ 0.95
HMG20AQ9NP66 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
HMG20AQ9NP66 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
HMG20AQ9NP66 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HMG20AQ9NP66 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HMG20AQ9NP66 ZNRF2P2-203ENST00000454624 420 ntBASIC20.97■□□□□ 0.95
HMG20AQ9NP66 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.97■□□□□ 0.95
HMG20AQ9NP66 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HMG20AQ9NP66 AC004812.2-201ENST00000611079 2094 ntBASIC20.97■□□□□ 0.95
HMG20AQ9NP66 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HMG20AQ9NP66 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMG20AQ9NP66 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMG20AQ9NP66 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.96■□□□□ 0.95
HMG20AQ9NP66 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.96■□□□□ 0.95
HMG20AQ9NP66 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HMG20AQ9NP66 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.95■□□□□ 0.95
HMG20AQ9NP66 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20AQ9NP66 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20AQ9NP66 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20AQ9NP66 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HMG20AQ9NP66 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20AQ9NP66 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms