Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40CQ96S21 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40CQ96S21 DUX4L11-201ENST00000611504 1267 ntBASIC18.85■□□□□ 0.61
RAB40CQ96S21 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB40CQ96S21 DUX4L12-201ENST00000614593 1267 ntBASIC18.85■□□□□ 0.61
RAB40CQ96S21 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40CQ96S21 DUX4L14-201ENST00000621227 1267 ntBASIC18.85■□□□□ 0.61
RAB40CQ96S21 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB40CQ96S21 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40CQ96S21 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB40CQ96S21 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
RAB40CQ96S21 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40CQ96S21 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB40CQ96S21 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40CQ96S21 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40CQ96S21 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40CQ96S21 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40CQ96S21 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB40CQ96S21 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB40CQ96S21 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB40CQ96S21 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RAB40CQ96S21 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40CQ96S21 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40CQ96S21 HLA-V-202ENST00000446817 847 ntBASIC18.83■□□□□ 0.6
RAB40CQ96S21 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.83■□□□□ 0.6
RAB40CQ96S21 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RAB40CQ96S21 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40CQ96S21 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40CQ96S21 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40CQ96S21 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40CQ96S21 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40CQ96S21 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40CQ96S21 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40CQ96S21 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40CQ96S21 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40CQ96S21 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40CQ96S21 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB40CQ96S21 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RAB40CQ96S21 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RAB40CQ96S21 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40CQ96S21 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40CQ96S21 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAB40CQ96S21 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40CQ96S21 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB40CQ96S21 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB40CQ96S21 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40CQ96S21 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40CQ96S21 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAB40CQ96S21 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40CQ96S21 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40CQ96S21 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40CQ96S21 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40CQ96S21 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB40CQ96S21 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40CQ96S21 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB40CQ96S21 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB40CQ96S21 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAB40CQ96S21 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40CQ96S21 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40CQ96S21 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB40CQ96S21 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAB40CQ96S21 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB40CQ96S21 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40CQ96S21 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40CQ96S21 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40CQ96S21 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40CQ96S21 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40CQ96S21 AL117328.2-201ENST00000624617 1940 ntBASIC18.79■□□□□ 0.6
RAB40CQ96S21 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB40CQ96S21 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB40CQ96S21 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40CQ96S21 C9orf163-202ENST00000624034 2573 ntBASIC18.79■□□□□ 0.6
RAB40CQ96S21 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40CQ96S21 HLA-L-211ENST00000482052 1765 ntBASIC18.78■□□□□ 0.6
RAB40CQ96S21 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40CQ96S21 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RAB40CQ96S21 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40CQ96S21 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RAB40CQ96S21 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40CQ96S21 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40CQ96S21 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB40CQ96S21 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40CQ96S21 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
RAB40CQ96S21 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RAB40CQ96S21 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40CQ96S21 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB40CQ96S21 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40CQ96S21 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB40CQ96S21 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
RAB40CQ96S21 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB40CQ96S21 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB40CQ96S21 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
RAB40CQ96S21 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB40CQ96S21 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40CQ96S21 CLDN5-201ENST00000403084 2357 ntBASIC18.77■□□□□ 0.6
RAB40CQ96S21 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB40CQ96S21 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40CQ96S21 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB40CQ96S21 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB40CQ96S21 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms