Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.518e-6■■■■□ 25.1
LSM11P83369 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.24■□□□□ 0.511e-10■■■■□ 25.1
LSM11P83369 CERS4-214ENST00000595722 1826 ntTSL 1 (best)18.02■□□□□ 0.488e-6■■■■□ 25.1
LSM11P83369 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.468e-6■■■■□ 25.1
LSM11P83369 DUSP22-208ENST00000603795 1166 ntTSL 317.82■□□□□ 0.448e-6■■■■□ 25.1
LSM11P83369 CRIPT-202ENST00000486447 1724 ntTSL 517.81■□□□□ 0.448e-6■■■■□ 25.1
LSM11P83369 CERS4-213ENST00000561053 768 ntTSL 517.44■□□□□ 0.388e-6■■■■□ 25.1
LSM11P83369 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.348e-6■■■■□ 25.1
LSM11P83369 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.15■□□□□ 0.348e-6■■■■□ 25.1
LSM11P83369 EIF4G1-226ENST00000450424 2658 ntTSL 517.1■□□□□ 0.338e-6■■■■□ 25.1
LSM11P83369 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.98■□□□□ 0.318e-6■■■■□ 25.1
LSM11P83369 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.311e-10■■■■□ 25.1
LSM11P83369 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.38e-6■■■■□ 25.1
LSM11P83369 EHMT1-224ENST00000630754 709 ntTSL 316.73■□□□□ 0.278e-6■■■■□ 25.1
LSM11P83369 EIF4G1-237ENST00000485712 474 ntTSL 416.64■□□□□ 0.258e-6■■■■□ 25.1
LSM11P83369 C11orf49-207ENST00000525895 1527 ntTSL 216.48■□□□□ 0.238e-6■■■■□ 25.1
LSM11P83369 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.24■□□□□ 0.198e-6■■■■□ 25.1
LSM11P83369 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.2■□□□□ 0.188e-6■■■■□ 25.1
LSM11P83369 C11orf49-212ENST00000527268 893 ntTSL 316.04■□□□□ 0.168e-6■■■■□ 25.1
LSM11P83369 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.148e-6■■■■□ 25.1
LSM11P83369 CERS4-216ENST00000600912 440 ntTSL 315.89■□□□□ 0.138e-6■■■■□ 25.1
LSM11P83369 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.76■□□□□ 0.114e-20■■■■□ 25.1
LSM11P83369 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.18e-6■■■■□ 25.1
LSM11P83369 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.58■□□□□ 0.098e-6■■■■□ 25.1
LSM11P83369 EIF4G1-208ENST00000413967 2808 ntTSL 215.58■□□□□ 0.098e-6■■■■□ 25.1
LSM11P83369 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.56■□□□□ 0.088e-6■■■■□ 25.1
LSM11P83369 EIF4G1-210ENST00000421110 2755 ntTSL 515.5■□□□□ 0.078e-6■■■■□ 25.1
LSM11P83369 CERS4-206ENST00000558501 873 ntTSL 515.44■□□□□ 0.068e-6■■■■□ 25.1
LSM11P83369 EHMT1-202ENST00000460486 818 ntTSL 515.21■□□□□ 0.038e-6■■■■□ 25.1
LSM11P83369 CERS4-211ENST00000560412 568 ntTSL 415.19■□□□□ 0.028e-6■■■■□ 25.1
LSM11P83369 EHMT1-250ENST00000637977 2167 ntTSL 514.76□□□□□ -0.058e-6■■■■□ 25.1
LSM11P83369 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.75□□□□□ -0.058e-6■■■■□ 25.1
LSM11P83369 EHMT1-219ENST00000626066 1297 ntTSL 514.66□□□□□ -0.068e-6■■■■□ 25.1
LSM11P83369 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.078e-6■■■■□ 25.1
LSM11P83369 EIF4G1-213ENST00000426123 2907 ntTSL 214.43□□□□□ -0.18e-6■■■■□ 25.1
LSM11P83369 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.26□□□□□ -0.138e-6■■■■□ 25.1
LSM11P83369 ACOX1-207ENST00000588176 574 ntTSL 414.07□□□□□ -0.162e-7■■■■□ 25.1
LSM11P83369 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.05□□□□□ -0.168e-6■■■■□ 25.1
LSM11P83369 APBA3-206ENST00000590238 830 ntTSL 514.01□□□□□ -0.178e-6■■■■□ 25.1
LSM11P83369 ACOX1-203ENST00000572047 2441 ntTSL 213.92□□□□□ -0.182e-7■■■■□ 25.1
LSM11P83369 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.198e-6■■■■□ 25.1
LSM11P83369 ULK1-205ENST00000541761 1262 ntTSL 213.84□□□□□ -0.198e-6■■■■□ 25.1
LSM11P83369 MEMO1-205ENST00000413686 769 ntTSL 313.82□□□□□ -0.28e-6■■■■□ 25.1
LSM11P83369 ABCC5-207ENST00000437341 591 ntTSL 513.67□□□□□ -0.228e-6■■■■□ 25.1
LSM11P83369 RAD9A-211ENST00000622583 565 ntTSL 213.56□□□□□ -0.248e-6■■■■□ 25.1
LSM11P83369 CERS4-212ENST00000561008 531 ntTSL 413.35□□□□□ -0.278e-6■■■■□ 25.1
LSM11P83369 EHMT1-201ENST00000371394 2679 ntTSL 213.34□□□□□ -0.278e-6■■■■□ 25.1
LSM11P83369 CNOT6L-207ENST00000515441 572 ntTSL 413.3□□□□□ -0.288e-6■■■■□ 25.1
LSM11P83369 ACOX1-209ENST00000589301 550 ntTSL 413.1□□□□□ -0.312e-7■■■■□ 25.1
LSM11P83369 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.322e-15■■■■□ 25.1
LSM11P83369 MEMO1-209ENST00000490459 1242 ntTSL 212.91□□□□□ -0.348e-6■■■■□ 25.1
LSM11P83369 LARP4B-207ENST00000476529 613 ntTSL 312.79□□□□□ -0.368e-6■■■■□ 25.1
LSM11P83369 C11orf49-214ENST00000527784 1069 ntTSL 212.77□□□□□ -0.378e-6■■■■□ 25.1
LSM11P83369 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.372e-15■■■■□ 25.1
LSM11P83369 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.68□□□□□ -0.388e-6■■■■□ 25.1
LSM11P83369 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.66□□□□□ -0.388e-6■■■■□ 25.1
LSM11P83369 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.48e-6■■■■□ 25.1
LSM11P83369 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.438e-6■■■■□ 25.1
LSM11P83369 ABCC5-209ENST00000443376 2000 ntTSL 1 (best)12.39□□□□□ -0.438e-6■■■■□ 25.1
LSM11P83369 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.431e-10■■■■□ 25.1
LSM11P83369 SEH1L-204ENST00000587761 863 ntTSL 512.27□□□□□ -0.454e-20■■■■□ 25.1
LSM11P83369 EHMT1-220ENST00000626216 558 ntTSL 312.26□□□□□ -0.458e-6■■■■□ 25.1
LSM11P83369 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.12□□□□□ -0.478e-6■■■■□ 25.1
LSM11P83369 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.472e-7■■■■□ 25.1
LSM11P83369 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.98□□□□□ -0.498e-6■■■■□ 25.1
LSM11P83369 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.52e-15■■■■□ 25.1
LSM11P83369 EIF4G1-227ENST00000455679 542 ntTSL 411.92□□□□□ -0.58e-6■■■■□ 25.1
LSM11P83369 C11orf49-209ENST00000526424 556 ntTSL 411.91□□□□□ -0.58e-6■■■■□ 25.1
LSM11P83369 INTS2-206ENST00000584967 663 ntTSL 411.9□□□□□ -0.58e-6■■■■□ 25.1
LSM11P83369 C11orf49-210ENST00000526827 714 ntTSL 211.86□□□□□ -0.518e-6■■■■□ 25.1
LSM11P83369 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC11.81□□□□□ -0.528e-6■■■■□ 25.1
LSM11P83369 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC11.66□□□□□ -0.548e-6■■■■□ 25.1
LSM11P83369 SEH1L-201ENST00000262124 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.554e-20■■■■□ 25.1
LSM11P83369 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC11.58□□□□□ -0.568e-6■■■■□ 25.1
LSM11P83369 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC11.47□□□□□ -0.578e-6■■■■□ 25.1
LSM11P83369 EHMT1-228ENST00000636027 3114 ntTSL 511.45□□□□□ -0.588e-6■■■■□ 25.1
LSM11P83369 C11orf49-220ENST00000533124 559 ntTSL 411.32□□□□□ -0.68e-6■■■■□ 25.1
LSM11P83369 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.628e-6■■■■□ 25.1
LSM11P83369 ASIC2-202ENST00000359872 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.648e-6■■■■□ 25.1
LSM11P83369 DUSP22-207ENST00000603726 587 ntTSL 511.01□□□□□ -0.658e-6■■■■□ 25.1
LSM11P83369 DUSP22-215ENST00000605391 547 ntTSL 411.01□□□□□ -0.658e-6■■■■□ 25.1
LSM11P83369 DUSP22-205ENST00000603296 405 ntTSL 311.01□□□□□ -0.658e-6■■■■□ 25.1
LSM11P83369 EHMT1-221ENST00000629335 3600 ntTSL 5 BASIC10.97□□□□□ -0.658e-6■■■■□ 25.1
LSM11P83369 SUPV3L1-203ENST00000471069 2392 ntTSL 1 (best)10.97□□□□□ -0.658e-6■■■■□ 25.1
LSM11P83369 DUSP22-209ENST00000603881 465 ntTSL 310.95□□□□□ -0.668e-6■■■■□ 25.1
LSM11P83369 RARA-208ENST00000577646 733 ntTSL 510.92□□□□□ -0.668e-6■■■■□ 25.1
LSM11P83369 EIF4G1-214ENST00000427141 730 ntTSL 510.8□□□□□ -0.688e-6■■■■□ 25.1
LSM11P83369 ABCC5-208ENST00000438979 821 ntTSL 510.74□□□□□ -0.698e-6■■■■□ 25.1
LSM11P83369 ACOX1-204ENST00000573078 2417 ntTSL 210.5□□□□□ -0.732e-7■■■■□ 25.1
LSM11P83369 ZFYVE9-205ENST00000469134 859 ntTSL 310.48□□□□□ -0.738e-6■■■■□ 25.1
LSM11P83369 INTS2-205ENST00000583822 1036 ntTSL 210.48□□□□□ -0.738e-6■■■■□ 25.1
LSM11P83369 LARP4B-208ENST00000481118 421 ntTSL 310.48□□□□□ -0.738e-6■■■■□ 25.1
LSM11P83369 DUSP22-203ENST00000603005 352 ntTSL 310.34□□□□□ -0.758e-6■■■■□ 25.1
LSM11P83369 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC10.21□□□□□ -0.788e-6■■■■□ 25.1
LSM11P83369 ARIH1-209ENST00000567762 319 ntTSL 310.11□□□□□ -0.798e-6■■■■□ 25.1
LSM11P83369 EHMT1-215ENST00000492232 710 ntTSL 310.1□□□□□ -0.798e-6■■■■□ 25.1
LSM11P83369 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC10.06□□□□□ -0.88e-6■■■■□ 25.1
LSM11P83369 ADGRV1-216ENST00000639212 1167 ntTSL 510.05□□□□□ -0.88e-6■■■■□ 25.1
LSM11P83369 AC068631.2-201ENST00000418776 501 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.821e-10■■■■□ 25.1
LSM11P83369 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC9.88□□□□□ -0.838e-6■■■■□ 25.1
Retrieved 100 of 11,495 protein–RNA pairs in 58.2 ms