Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.4■■□□□ 1.66
SOX1O00570 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.4■■□□□ 1.66
SOX1O00570 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SOX1O00570 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SOX1O00570 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SOX1O00570 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.39■■□□□ 1.66
SOX1O00570 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SOX1O00570 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.38■■□□□ 1.65
SOX1O00570 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SOX1O00570 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
SOX1O00570 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SOX1O00570 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SOX1O00570 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SOX1O00570 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.37■■□□□ 1.65
SOX1O00570 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.37■■□□□ 1.65
SOX1O00570 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.37■■□□□ 1.65
SOX1O00570 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.37■■□□□ 1.65
SOX1O00570 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SOX1O00570 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
SOX1O00570 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SOX1O00570 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.36■■□□□ 1.65
SOX1O00570 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SOX1O00570 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SOX1O00570 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SOX1O00570 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.36■■□□□ 1.65
SOX1O00570 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.36■■□□□ 1.65
SOX1O00570 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SOX1O00570 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SOX1O00570 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.35■■□□□ 1.65
SOX1O00570 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.35■■□□□ 1.65
SOX1O00570 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
SOX1O00570 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.35■■□□□ 1.65
SOX1O00570 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.35■■□□□ 1.65
SOX1O00570 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SOX1O00570 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
SOX1O00570 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SOX1O00570 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.34■■□□□ 1.65
SOX1O00570 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.34■■□□□ 1.65
SOX1O00570 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.34■■□□□ 1.65
SOX1O00570 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.33■■□□□ 1.65
SOX1O00570 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
SOX1O00570 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SOX1O00570 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.33■■□□□ 1.65
SOX1O00570 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
SOX1O00570 AC092171.4-201ENST00000609130 632 ntBASIC25.33■■□□□ 1.65
SOX1O00570 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.33■■□□□ 1.64
SOX1O00570 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.32■■□□□ 1.64
SOX1O00570 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.32■■□□□ 1.64
SOX1O00570 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SOX1O00570 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.32■■□□□ 1.64
SOX1O00570 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
SOX1O00570 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.32■■□□□ 1.64
SOX1O00570 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SOX1O00570 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.32■■□□□ 1.64
SOX1O00570 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SOX1O00570 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SOX1O00570 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SOX1O00570 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SOX1O00570 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SOX1O00570 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
SOX1O00570 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SOX1O00570 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
SOX1O00570 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.31■■□□□ 1.64
SOX1O00570 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.31■■□□□ 1.64
SOX1O00570 AC011298.3-201ENST00000615796 283 ntBASIC25.31■■□□□ 1.64
SOX1O00570 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SOX1O00570 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SOX1O00570 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.3■■□□□ 1.64
SOX1O00570 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SOX1O00570 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.3■■□□□ 1.64
SOX1O00570 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.3■■□□□ 1.64
SOX1O00570 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.3■■□□□ 1.64
SOX1O00570 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
SOX1O00570 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SOX1O00570 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.29■■□□□ 1.64
SOX1O00570 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.29■■□□□ 1.64
SOX1O00570 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.29■■□□□ 1.64
SOX1O00570 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SOX1O00570 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.28■■□□□ 1.64
SOX1O00570 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.28■■□□□ 1.64
SOX1O00570 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.28■■□□□ 1.64
SOX1O00570 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
SOX1O00570 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
SOX1O00570 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.27■■□□□ 1.64
SOX1O00570 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.27■■□□□ 1.64
SOX1O00570 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.27■■□□□ 1.64
SOX1O00570 AL139393.2-201ENST00000608721 2025 ntBASIC25.27■■□□□ 1.64
SOX1O00570 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.26■■□□□ 1.63
SOX1O00570 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SOX1O00570 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
SOX1O00570 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SOX1O00570 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SOX1O00570 AC099791.2-201ENST00000605725 427 ntBASIC25.25■■□□□ 1.63
SOX1O00570 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SOX1O00570 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SOX1O00570 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.24■■□□□ 1.63
SOX1O00570 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.24■■□□□ 1.63
SOX1O00570 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.24■■□□□ 1.63
SOX1O00570 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.23■■□□□ 1.63
SOX1O00570 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms