Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPK1AO00322 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPK1AO00322 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
UPK1AO00322 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UPK1AO00322 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UPK1AO00322 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
UPK1AO00322 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UPK1AO00322 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UPK1AO00322 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.16■■□□□ 1.14
UPK1AO00322 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
UPK1AO00322 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.16■■□□□ 1.14
UPK1AO00322 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UPK1AO00322 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UPK1AO00322 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UPK1AO00322 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UPK1AO00322 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.16■■□□□ 1.14
UPK1AO00322 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
UPK1AO00322 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
UPK1AO00322 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UPK1AO00322 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.15■■□□□ 1.14
UPK1AO00322 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
UPK1AO00322 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
UPK1AO00322 AC018755.3-202ENST00000596210 929 ntBASIC22.15■■□□□ 1.14
UPK1AO00322 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.15■■□□□ 1.14
UPK1AO00322 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
UPK1AO00322 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
UPK1AO00322 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
UPK1AO00322 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.14■■□□□ 1.14
UPK1AO00322 KRT18P60-201ENST00000312876 1297 ntBASIC22.14■■□□□ 1.13
UPK1AO00322 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.14■■□□□ 1.13
UPK1AO00322 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.14■■□□□ 1.13
UPK1AO00322 DUX4L9-201ENST00000449051 1259 ntBASIC22.14■■□□□ 1.13
UPK1AO00322 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.14■■□□□ 1.13
UPK1AO00322 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
UPK1AO00322 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
UPK1AO00322 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
UPK1AO00322 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
UPK1AO00322 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
UPK1AO00322 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UPK1AO00322 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UPK1AO00322 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.13■■□□□ 1.13
UPK1AO00322 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UPK1AO00322 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UPK1AO00322 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
UPK1AO00322 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UPK1AO00322 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
UPK1AO00322 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.12■■□□□ 1.13
UPK1AO00322 AC129492.7-201ENST00000622992 756 ntBASIC22.12■■□□□ 1.13
UPK1AO00322 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UPK1AO00322 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.12■■□□□ 1.13
UPK1AO00322 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
UPK1AO00322 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
UPK1AO00322 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
UPK1AO00322 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
UPK1AO00322 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UPK1AO00322 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UPK1AO00322 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.11■■□□□ 1.13
UPK1AO00322 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
UPK1AO00322 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
UPK1AO00322 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
UPK1AO00322 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
UPK1AO00322 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
UPK1AO00322 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UPK1AO00322 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.1■■□□□ 1.13
UPK1AO00322 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UPK1AO00322 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UPK1AO00322 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
UPK1AO00322 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UPK1AO00322 NTF6A-201ENST00000591175 560 ntBASIC22.1■■□□□ 1.13
UPK1AO00322 MIR6765-201ENST00000614092 87 ntBASIC22.1■■□□□ 1.13
UPK1AO00322 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UPK1AO00322 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UPK1AO00322 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.09■■□□□ 1.13
UPK1AO00322 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.09■■□□□ 1.13
UPK1AO00322 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UPK1AO00322 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UPK1AO00322 RPS2P7-201ENST00000447334 885 ntBASIC22.09■■□□□ 1.13
UPK1AO00322 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.09■■□□□ 1.13
UPK1AO00322 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
UPK1AO00322 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
UPK1AO00322 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.08■■□□□ 1.13
UPK1AO00322 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.08■■□□□ 1.13
UPK1AO00322 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
UPK1AO00322 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
UPK1AO00322 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
UPK1AO00322 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
UPK1AO00322 AC141586.4-201ENST00000624558 1573 ntBASIC22.08■■□□□ 1.12
UPK1AO00322 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
UPK1AO00322 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
UPK1AO00322 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
UPK1AO00322 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
UPK1AO00322 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
UPK1AO00322 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UPK1AO00322 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.07■■□□□ 1.12
UPK1AO00322 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
UPK1AO00322 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UPK1AO00322 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.06■■□□□ 1.12
UPK1AO00322 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UPK1AO00322 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.06■■□□□ 1.12
UPK1AO00322 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms