Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav16A0A075B653 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav16A0A075B653 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav16A0A075B653 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav16A0A075B653 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav16A0A075B653 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav16A0A075B653 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Trav16A0A075B653 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav16A0A075B653 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav16A0A075B653 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav16A0A075B653 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Trav16A0A075B653 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav16A0A075B653 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav16A0A075B653 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav16A0A075B653 Gm8503-201ENSMUST00000118131 455 ntBASIC16.16■□□□□ 0.18
Trav16A0A075B653 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav16A0A075B653 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav16A0A075B653 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav16A0A075B653 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav16A0A075B653 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav16A0A075B653 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16A0A075B653 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16A0A075B653 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16A0A075B653 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav16A0A075B653 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16A0A075B653 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16A0A075B653 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16A0A075B653 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16A0A075B653 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16A0A075B653 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav16A0A075B653 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16A0A075B653 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16A0A075B653 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16A0A075B653 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16A0A075B653 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16A0A075B653 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav16A0A075B653 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16A0A075B653 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16A0A075B653 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav16A0A075B653 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16A0A075B653 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Trav16A0A075B653 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16A0A075B653 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16A0A075B653 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav16A0A075B653 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav16A0A075B653 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav16A0A075B653 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.11■□□□□ 0.17
Trav16A0A075B653 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16A0A075B653 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16A0A075B653 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Trav16A0A075B653 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16A0A075B653 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16A0A075B653 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16A0A075B653 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.1■□□□□ 0.17
Trav16A0A075B653 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16A0A075B653 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav16A0A075B653 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16A0A075B653 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16A0A075B653 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav16A0A075B653 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16A0A075B653 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16A0A075B653 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav16A0A075B653 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16A0A075B653 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav16A0A075B653 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav16A0A075B653 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16A0A075B653 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16A0A075B653 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16A0A075B653 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav16A0A075B653 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16A0A075B653 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16A0A075B653 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav16A0A075B653 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav16A0A075B653 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16A0A075B653 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav16A0A075B653 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav16A0A075B653 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms