Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSX2IPQ9Y2D8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 AC026691.1-201ENST00000602502 2017 ntBASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 AL512343.1-201ENST00000605837 169 ntBASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 MIR6799-201ENST00000620297 69 ntBASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.98■□□□□ 0.31
SSX2IPQ9Y2D8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 AC022188.1-201ENST00000620960 1664 ntBASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 HLA-A-202ENST00000376806 1854 ntBASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 AL162726.2-201ENST00000438986 1017 ntBASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 AC133539.2-201ENST00000604757 467 ntBASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSX2IPQ9Y2D8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 CDC14C-201ENST00000428251 1719 ntBASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms