Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 SPDYE17-201ENST00000412399 783 ntBASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 KRT8P37-201ENST00000451609 1420 ntBASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 AC026979.3-201ENST00000607315 403 ntBASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 AL162727.3-201ENST00000635661 2787 ntBASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HPS5Q9UPZ3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 RRP7BP-205ENST00000566851 833 ntBASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.69■□□□□ 0.58
HPS5Q9UPZ3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 AZGP1P1-201ENST00000411909 902 ntBASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 AL033527.5-202ENST00000641632 1098 ntBASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 CICP13-201ENST00000422015 2789 ntBASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms