Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC21.12■□□□□ 0.97
PHF8Q9UPP1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC21.12■□□□□ 0.97
PHF8Q9UPP1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHF8Q9UPP1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHF8Q9UPP1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHF8Q9UPP1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.12■□□□□ 0.97
PHF8Q9UPP1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHF8Q9UPP1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHF8Q9UPP1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHF8Q9UPP1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 AL158070.2-201ENST00000623713 1621 ntBASIC21.11■□□□□ 0.97
PHF8Q9UPP1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 FTLP10-202ENST00000505798 471 ntBASIC21.11■□□□□ 0.97
PHF8Q9UPP1 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 AC022217.1-201ENST00000521069 738 ntBASIC21.11■□□□□ 0.97
PHF8Q9UPP1 MIR5572-201ENST00000583188 137 ntBASIC21.11■□□□□ 0.97
PHF8Q9UPP1 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 AL645939.5-201ENST00000606834 243 ntBASIC21.11■□□□□ 0.97
PHF8Q9UPP1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 KRT8P4-201ENST00000509735 1454 ntBASIC21.11■□□□□ 0.97
PHF8Q9UPP1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PHF8Q9UPP1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 AL354877.1-201ENST00000424412 413 ntBASIC21.1■□□□□ 0.97
PHF8Q9UPP1 CHMP1AP1-201ENST00000445563 662 ntBASIC21.1■□□□□ 0.97
PHF8Q9UPP1 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 AC100850.1-201ENST00000506768 649 ntBASIC21.1■□□□□ 0.97
PHF8Q9UPP1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 FGFR3P5-201ENST00000564496 886 ntBASIC21.1■□□□□ 0.97
PHF8Q9UPP1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHF8Q9UPP1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 CRCP-204ENST00000398684 492 ntTSL 2 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AC104457.1-201ENST00000401024 814 ntBASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AC253536.4-201ENST00000440539 267 ntBASIC21.09■□□□□ 0.97
PHF8Q9UPP1 RN7SL11P-201ENST00000471305 293 ntBASIC21.09■□□□□ 0.97
PHF8Q9UPP1 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AC004066.1-201ENST00000502488 802 ntBASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AC134698.3-201ENST00000523880 214 ntBASIC21.09■□□□□ 0.97
PHF8Q9UPP1 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 RN7SL574P-201ENST00000581512 297 ntBASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC21.09■□□□□ 0.97
PHF8Q9UPP1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 AC011676.5-201ENST00000624864 2660 ntBASIC21.09■□□□□ 0.97
PHF8Q9UPP1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PHF8Q9UPP1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms