Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 ACTBP8-201ENST00000403258 1108 ntBASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 AC012441.1-201ENST00000446669 685 ntBASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 BX539320.1-201ENST00000623759 877 ntBASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 AC104640.1-201ENST00000562617 2109 ntBASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 KRT8P14-201ENST00000414254 1442 ntBASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPC1L1Q9UHC9 CICP11-201ENST00000434745 2827 ntBASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 AC148477.4-201ENST00000613430 1793 ntBASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 RNU1-114P-201ENST00000365297 166 ntBASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 AC009486.1-201ENST00000569860 813 ntBASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 AP005019.2-201ENST00000615104 511 ntBASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 AC023024.2-201ENST00000623561 1993 ntBASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 AL158070.2-201ENST00000623713 1621 ntBASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPC1L1Q9UHC9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NPC1L1Q9UHC9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPC1L1Q9UHC9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC20.89■□□□□ 0.94
NPC1L1Q9UHC9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPC1L1Q9UHC9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPC1L1Q9UHC9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 AL139094.1-201ENST00000405549 1188 ntBASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 TMEM14DP-201ENST00000422205 345 ntBASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 AC132938.2-201ENST00000579188 680 ntBASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 AC008735.3-201ENST00000596646 500 ntBASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 AL591163.1-201ENST00000641757 987 ntBASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 AC006486.2-201ENST00000624246 2199 ntBASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 AC063926.2-201ENST00000623766 1308 ntBASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 AC012508.2-201ENST00000567613 1472 ntBASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPC1L1Q9UHC9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms