Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TLR9Q9NR96 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TLR9Q9NR96 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 AC104306.2-201ENST00000451877 341 ntBASIC16.62■□□□□ 0.25
TLR9Q9NR96 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 AC078819.1-201ENST00000547454 765 ntBASIC16.62■□□□□ 0.25
TLR9Q9NR96 AC012085.1-201ENST00000548270 765 ntBASIC16.62■□□□□ 0.25
TLR9Q9NR96 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.62■□□□□ 0.25
TLR9Q9NR96 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TLR9Q9NR96 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 AL133267.1-201ENST00000398220 340 ntBASIC16.61■□□□□ 0.25
TLR9Q9NR96 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 BTBD6P1-201ENST00000412176 1267 ntBASIC16.61■□□□□ 0.25
TLR9Q9NR96 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 AHCYP2-201ENST00000430630 1300 ntBASIC16.61■□□□□ 0.25
TLR9Q9NR96 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TLR9Q9NR96 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TLR9Q9NR96 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TLR9Q9NR96 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms