Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 AC087499.6-201ENST00000411576 835 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 MEP1AP4-201ENST00000423244 1087 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 DFFBP1-201ENST00000433250 979 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 AL353779.1-201ENST00000434793 351 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 GNAQP1-201ENST00000444815 1067 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 SPDYE18-201ENST00000510091 1050 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 AL662799.1-202ENST00000614205 422 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 AC105917.1-201ENST00000506637 2539 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 TPRX2P-201ENST00000535362 881 ntBASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AL450472.2-201ENST00000603663 1156 ntBASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AF228730.6-201ENST00000641497 218 ntBASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AC084121.3-201ENST00000641716 218 ntBASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AC105233.6-201ENST00000642093 218 ntBASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 Z97205.2-201ENST00000564697 1639 ntBASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms