Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
DDX1Q92499 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
DDX1Q92499 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
DDX1Q92499 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.75■□□□□ 0.27
DDX1Q92499 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.75■□□□□ 0.27
DDX1Q92499 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 AC092580.3-201ENST00000430932 139 ntBASIC16.75■□□□□ 0.27
DDX1Q92499 AC241585.1-201ENST00000433527 519 ntBASIC16.75■□□□□ 0.27
DDX1Q92499 KRT18P64-201ENST00000434946 1219 ntBASIC16.75■□□□□ 0.27
DDX1Q92499 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.75■□□□□ 0.27
DDX1Q92499 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 SERBP1P5-201ENST00000510079 1181 ntBASIC16.75■□□□□ 0.27
DDX1Q92499 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.75■□□□□ 0.27
DDX1Q92499 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
DDX1Q92499 AC010336.2-201ENST00000564226 506 ntBASIC16.75■□□□□ 0.27
DDX1Q92499 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.75■□□□□ 0.27
DDX1Q92499 AC084346.2-201ENST00000607097 949 ntBASIC16.75■□□□□ 0.27
DDX1Q92499 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.75■□□□□ 0.27
DDX1Q92499 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.75■□□□□ 0.27
DDX1Q92499 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.75■□□□□ 0.27
DDX1Q92499 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
DDX1Q92499 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.75■□□□□ 0.27
DDX1Q92499 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DDX1Q92499 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
DDX1Q92499 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.75■□□□□ 0.27
DDX1Q92499 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
DDX1Q92499 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.74■□□□□ 0.27
DDX1Q92499 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.74■□□□□ 0.27
DDX1Q92499 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
DDX1Q92499 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
DDX1Q92499 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DDX1Q92499 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
DDX1Q92499 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.74■□□□□ 0.27
DDX1Q92499 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DDX1Q92499 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
DDX1Q92499 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.74■□□□□ 0.27
DDX1Q92499 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.74■□□□□ 0.27
DDX1Q92499 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
DDX1Q92499 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.74■□□□□ 0.27
DDX1Q92499 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.74■□□□□ 0.27
DDX1Q92499 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.74■□□□□ 0.27
DDX1Q92499 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.74■□□□□ 0.27
DDX1Q92499 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.74■□□□□ 0.27
DDX1Q92499 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.74■□□□□ 0.27
DDX1Q92499 AC097493.3-201ENST00000509725 367 ntBASIC16.74■□□□□ 0.27
DDX1Q92499 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.74■□□□□ 0.27
DDX1Q92499 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.74■□□□□ 0.27
DDX1Q92499 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DDX1Q92499 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
DDX1Q92499 AL606495.2-201ENST00000605867 535 ntBASIC16.74■□□□□ 0.27
DDX1Q92499 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.74■□□□□ 0.27
DDX1Q92499 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.74■□□□□ 0.27
DDX1Q92499 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DDX1Q92499 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.74■□□□□ 0.27
DDX1Q92499 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.74■□□□□ 0.27
DDX1Q92499 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DDX1Q92499 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
DDX1Q92499 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.73■□□□□ 0.27
DDX1Q92499 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.73■□□□□ 0.27
DDX1Q92499 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.73■□□□□ 0.27
DDX1Q92499 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.73■□□□□ 0.27
DDX1Q92499 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.73■□□□□ 0.27
DDX1Q92499 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.73■□□□□ 0.27
DDX1Q92499 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.73■□□□□ 0.27
DDX1Q92499 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.73■□□□□ 0.27
DDX1Q92499 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms