Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM48Q8IWZ4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AC015922.1-201ENST00000421102 1152 ntBASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 GNAQP1-201ENST00000444815 1067 ntBASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AC025048.3-201ENST00000590609 569 ntBASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AC005702.4-201ENST00000618393 416 ntBASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AC004461.2-201ENST00000629517 803 ntBASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AC026691.1-201ENST00000602502 2017 ntBASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM48Q8IWZ4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 HIST3H2BA-201ENST00000436555 524 ntBASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 AC093004.1-201ENST00000508850 424 ntBASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 TPRX2P-201ENST00000535362 881 ntBASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM48Q8IWZ4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms