Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRNP1Q6NT89 CICP11-201ENST00000434745 2827 ntBASIC16.32■□□□□ 0.2
TRNP1Q6NT89 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 AL133267.1-201ENST00000398220 340 ntBASIC16.32■□□□□ 0.2
TRNP1Q6NT89 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 KRT18P43-201ENST00000469825 1281 ntBASIC16.32■□□□□ 0.2
TRNP1Q6NT89 MEIS3P1-201ENST00000495167 958 ntBASIC16.32■□□□□ 0.2
TRNP1Q6NT89 SERBP1P5-201ENST00000510079 1181 ntBASIC16.32■□□□□ 0.2
TRNP1Q6NT89 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 RNA5SP421-201ENST00000516864 134 ntBASIC16.32■□□□□ 0.2
TRNP1Q6NT89 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 AC138969.3-201ENST00000546612 1459 ntBASIC16.32■□□□□ 0.2
TRNP1Q6NT89 AC138932.2-201ENST00000548268 1459 ntBASIC16.32■□□□□ 0.2
TRNP1Q6NT89 AC126755.4-201ENST00000549796 1459 ntBASIC16.32■□□□□ 0.2
TRNP1Q6NT89 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRNP1Q6NT89 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.31■□□□□ 0.2
TRNP1Q6NT89 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 SPTLC1P1-201ENST00000447199 261 ntBASIC16.31■□□□□ 0.2
TRNP1Q6NT89 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 AC000095.1-201ENST00000603208 874 ntBASIC16.31■□□□□ 0.2
TRNP1Q6NT89 AL096865.1-201ENST00000606796 927 ntBASIC16.31■□□□□ 0.2
TRNP1Q6NT89 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRNP1Q6NT89 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms