Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 AC092127.1-201ENST00000567093 3455 ntBASIC12.61□□□□□ -0.39
FAM78BQ5VT40 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 RPS2P1-201ENST00000434010 821 ntBASIC12.6□□□□□ -0.39
FAM78BQ5VT40 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 FAM197Y8-203ENST00000450145 560 ntBASIC12.6□□□□□ -0.39
FAM78BQ5VT40 RPS15P9-201ENST00000494093 319 ntBASIC12.6□□□□□ -0.39
FAM78BQ5VT40 RNPS1P1-201ENST00000507437 918 ntBASIC12.6□□□□□ -0.39
FAM78BQ5VT40 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 AL121912.1-201ENST00000603683 238 ntBASIC12.6□□□□□ -0.39
FAM78BQ5VT40 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 AL137784.3-201ENST00000623858 2288 ntBASIC12.6□□□□□ -0.39
FAM78BQ5VT40 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.6□□□□□ -0.39
FAM78BQ5VT40 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.59□□□□□ -0.39
FAM78BQ5VT40 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.59□□□□□ -0.39
FAM78BQ5VT40 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms