Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 AC025279.2-201ENST00000569730 653 ntBASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 AC145423.3-201ENST00000615987 467 ntBASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 TUBB1P2-201ENST00000422712 1306 ntBASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 TUBB1P1-201ENST00000503144 1300 ntBASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SHROOM1Q2M3G4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 RNU1-114P-201ENST00000365297 166 ntBASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 CNN2P8-201ENST00000421872 913 ntBASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 AC025181.2-201ENST00000606994 802 ntBASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHROOM1Q2M3G4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 ACKR1-201ENST00000368121 1240 ntBASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHROOM1Q2M3G4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.5
SHROOM1Q2M3G4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AC148477.4-201ENST00000613430 1793 ntBASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 FAM21FP-201ENST00000426241 1131 ntBASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms