Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB3Q05901 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB3Q05901 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB3Q05901 AC232323.1-201ENST00000540724 2099 ntBASIC15.01□□□□□ -0.01
CHRNB3Q05901 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB3Q05901 REXO1L5P-201ENST00000622260 2098 ntBASIC15.01□□□□□ -0.01
CHRNB3Q05901 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15□□□□□ -0.01
CHRNB3Q05901 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15□□□□□ -0.01
CHRNB3Q05901 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHRNB3Q05901 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHRNB3Q05901 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CHRNB3Q05901 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHRNB3Q05901 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CHRNB3Q05901 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15□□□□□ -0.01
CHRNB3Q05901 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 MIR940-201ENST00000401276 94 ntBASIC15□□□□□ -0.01
CHRNB3Q05901 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHRNB3Q05901 AC098831.1-202ENST00000438821 336 ntBASIC15□□□□□ -0.01
CHRNB3Q05901 AL591424.1-201ENST00000442569 1213 ntBASIC15□□□□□ -0.01
CHRNB3Q05901 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHRNB3Q05901 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15□□□□□ -0.01
CHRNB3Q05901 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15□□□□□ -0.01
CHRNB3Q05901 AC145285.3-201ENST00000564603 959 ntBASIC15□□□□□ -0.01
CHRNB3Q05901 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15□□□□□ -0.01
CHRNB3Q05901 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 MIR4321-201ENST00000592276 80 ntBASIC15□□□□□ -0.01
CHRNB3Q05901 AC027601.4-201ENST00000611259 610 ntBASIC15□□□□□ -0.01
CHRNB3Q05901 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15□□□□□ -0.01
CHRNB3Q05901 AC005593.1-201ENST00000624894 515 ntBASIC15□□□□□ -0.01
CHRNB3Q05901 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15□□□□□ -0.01
CHRNB3Q05901 AC126365.1-201ENST00000578585 1514 ntBASIC15□□□□□ -0.01
CHRNB3Q05901 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15□□□□□ -0.01
CHRNB3Q05901 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
CHRNB3Q05901 AL390755.1-201ENST00000623716 2027 ntBASIC15□□□□□ -0.01
CHRNB3Q05901 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15□□□□□ -0.01
CHRNB3Q05901 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHRNB3Q05901 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNB3Q05901 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 KRT8P44-201ENST00000441609 1350 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 MROH4P-201ENST00000431302 1578 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 AC073621.1-201ENST00000392730 636 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 KRT18P13-201ENST00000400056 1290 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 MRPL20P1-201ENST00000400819 433 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 KRT18P27-201ENST00000427733 1299 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 IGHV3-22-201ENST00000520721 359 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 IGHV3-65-201ENST00000523210 341 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 LINC00528-201ENST00000600723 2160 ntBASIC14.99□□□□□ -0.01
CHRNB3Q05901 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CHRNB3Q05901 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNB3Q05901 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms