Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN5P54829 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN5P54829 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN5P54829 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN5P54829 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN5P54829 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN5P54829 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN5P54829 AC091804.1-201ENST00000486888 567 ntBASIC16.28■□□□□ 0.2
PTPN5P54829 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN5P54829 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.28■□□□□ 0.2
PTPN5P54829 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN5P54829 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN5P54829 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN5P54829 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN5P54829 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTPN5P54829 AL008638.5-201ENST00000623814 1298 ntBASIC16.28■□□□□ 0.2
PTPN5P54829 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.28■□□□□ 0.2
PTPN5P54829 RHOXF1P1-202ENST00000635473 501 ntBASIC16.28■□□□□ 0.2
PTPN5P54829 AC008687.7-202ENST00000637404 953 ntBASIC16.28■□□□□ 0.2
PTPN5P54829 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN5P54829 AC005052.1-201ENST00000625181 2492 ntBASIC16.28■□□□□ 0.2
PTPN5P54829 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN5P54829 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PTPN5P54829 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN5P54829 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN5P54829 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN5P54829 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN5P54829 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN5P54829 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN5P54829 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN5P54829 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN5P54829 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTPN5P54829 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PTPN5P54829 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN5P54829 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN5P54829 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN5P54829 AC092978.1-202ENST00000637590 1327 ntBASIC16.27■□□□□ 0.2
PTPN5P54829 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN5P54829 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN5P54829 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTPN5P54829 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PTPN5P54829 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN5P54829 AC016694.1-201ENST00000434179 700 ntBASIC16.27■□□□□ 0.2
PTPN5P54829 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN5P54829 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
PTPN5P54829 RN7SL399P-201ENST00000471648 279 ntBASIC16.27■□□□□ 0.2
PTPN5P54829 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN5P54829 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN5P54829 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN5P54829 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN5P54829 AC036164.1-201ENST00000570544 333 ntBASIC16.27■□□□□ 0.2
PTPN5P54829 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN5P54829 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN5P54829 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PTPN5P54829 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.27■□□□□ 0.2
PTPN5P54829 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN5P54829 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.27■□□□□ 0.2
PTPN5P54829 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN5P54829 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PTPN5P54829 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN5P54829 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN5P54829 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN5P54829 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PTPN5P54829 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPN5P54829 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PTPN5P54829 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN5P54829 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PTPN5P54829 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPN5P54829 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPN5P54829 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN5P54829 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN5P54829 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PTPN5P54829 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN5P54829 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN5P54829 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN5P54829 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN5P54829 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN5P54829 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN5P54829 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PTPN5P54829 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PTPN5P54829 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN5P54829 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN5P54829 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN5P54829 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN5P54829 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN5P54829 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN5P54829 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN5P54829 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms