Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TM4SF4P48230 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF4P48230 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
TM4SF4P48230 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.59■□□□□ 0.41
TM4SF4P48230 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.59■□□□□ 0.41
TM4SF4P48230 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TM4SF4P48230 MIR4649-201ENST00000582839 64 ntBASIC17.59■□□□□ 0.41
TM4SF4P48230 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.59■□□□□ 0.41
TM4SF4P48230 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.59■□□□□ 0.41
TM4SF4P48230 AL358472.3-201ENST00000608147 415 ntBASIC17.59■□□□□ 0.41
TM4SF4P48230 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.59■□□□□ 0.41
TM4SF4P48230 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF4P48230 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF4P48230 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.59■□□□□ 0.41
TM4SF4P48230 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.59■□□□□ 0.41
TM4SF4P48230 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TM4SF4P48230 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.58■□□□□ 0.41
TM4SF4P48230 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.58■□□□□ 0.41
TM4SF4P48230 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM4SF4P48230 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM4SF4P48230 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.58■□□□□ 0.41
TM4SF4P48230 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM4SF4P48230 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM4SF4P48230 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM4SF4P48230 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.58■□□□□ 0.41
TM4SF4P48230 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM4SF4P48230 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TM4SF4P48230 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TM4SF4P48230 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 RPS9P1-201ENST00000419943 583 ntBASIC17.58■□□□□ 0.4
TM4SF4P48230 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.58■□□□□ 0.4
TM4SF4P48230 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.58■□□□□ 0.4
TM4SF4P48230 POU5F1P2-201ENST00000521750 823 ntBASIC17.58■□□□□ 0.4
TM4SF4P48230 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.58■□□□□ 0.4
TM4SF4P48230 AP002803.1-201ENST00000528836 498 ntBASIC17.58■□□□□ 0.4
TM4SF4P48230 AC009779.1-201ENST00000551138 283 ntBASIC17.58■□□□□ 0.4
TM4SF4P48230 AC138894.2-201ENST00000602838 371 ntBASIC17.58■□□□□ 0.4
TM4SF4P48230 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.58■□□□□ 0.4
TM4SF4P48230 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TM4SF4P48230 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF4P48230 AC022188.1-201ENST00000620960 1664 ntBASIC17.58■□□□□ 0.4
TM4SF4P48230 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TM4SF4P48230 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF4P48230 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF4P48230 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 AP000593.2-201ENST00000542775 1433 ntBASIC17.57■□□□□ 0.4
TM4SF4P48230 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TM4SF4P48230 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF4P48230 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TM4SF4P48230 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TM4SF4P48230 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TM4SF4P48230 AC074138.1-201ENST00000611182 1303 ntBASIC17.57■□□□□ 0.4
TM4SF4P48230 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TM4SF4P48230 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.57■□□□□ 0.4
TM4SF4P48230 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TM4SF4P48230 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.57■□□□□ 0.4
TM4SF4P48230 RN7SL258P-201ENST00000478664 300 ntBASIC17.57■□□□□ 0.4
TM4SF4P48230 HLA-J-204ENST00000495278 958 ntBASIC17.57■□□□□ 0.4
TM4SF4P48230 RCC2P8-201ENST00000502779 1035 ntBASIC17.57■□□□□ 0.4
TM4SF4P48230 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.57■□□□□ 0.4
TM4SF4P48230 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.57■□□□□ 0.4
TM4SF4P48230 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.57■□□□□ 0.4
TM4SF4P48230 AL031713.1-201ENST00000564813 661 ntBASIC17.57■□□□□ 0.4
TM4SF4P48230 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.57■□□□□ 0.4
TM4SF4P48230 MIR4683-201ENST00000579659 81 ntBASIC17.57■□□□□ 0.4
TM4SF4P48230 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.57■□□□□ 0.4
TM4SF4P48230 AL136301.1-201ENST00000615830 422 ntBASIC17.57■□□□□ 0.4
TM4SF4P48230 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.57■□□□□ 0.4
TM4SF4P48230 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF4P48230 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF4P48230 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.57■□□□□ 0.4
TM4SF4P48230 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms