Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC107890.1-201ENST00000422478 521 ntBASIC14.51□□□□□ -0.09
SHC1P29353 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.51□□□□□ -0.09
SHC1P29353 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.51□□□□□ -0.09
SHC1P29353 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.51□□□□□ -0.09
SHC1P29353 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.51□□□□□ -0.09
SHC1P29353 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.51□□□□□ -0.09
SHC1P29353 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.51□□□□□ -0.09
SHC1P29353 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.51□□□□□ -0.09
SHC1P29353 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
SHC1P29353 SPDYE12P-201ENST00000618416 771 ntBASIC14.51□□□□□ -0.09
SHC1P29353 SSR4P1-203ENST00000599569 2260 ntBASIC14.51□□□□□ -0.09
SHC1P29353 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.51□□□□□ -0.09
SHC1P29353 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
SHC1P29353 CYP4F24P-201ENST00000586049 1580 ntBASIC14.51□□□□□ -0.09
SHC1P29353 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SHC1P29353 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHC1P29353 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.51□□□□□ -0.09
SHC1P29353 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SHC1P29353 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.5□□□□□ -0.09
SHC1P29353 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.5□□□□□ -0.09
SHC1P29353 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.5□□□□□ -0.09
SHC1P29353 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 FO538757.1-201ENST00000623083 1397 ntBASIC14.5□□□□□ -0.09
SHC1P29353 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SHC1P29353 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SHC1P29353 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.5□□□□□ -0.09
SHC1P29353 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.5□□□□□ -0.09
SHC1P29353 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.5□□□□□ -0.09
SHC1P29353 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SHC1P29353 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.5□□□□□ -0.09
SHC1P29353 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.5□□□□□ -0.09
SHC1P29353 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.5□□□□□ -0.09
SHC1P29353 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SHC1P29353 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.5□□□□□ -0.09
SHC1P29353 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.5□□□□□ -0.09
SHC1P29353 AL390955.2-201ENST00000603032 514 ntBASIC14.5□□□□□ -0.09
SHC1P29353 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.5□□□□□ -0.09
SHC1P29353 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SHC1P29353 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.5□□□□□ -0.09
SHC1P29353 FLJ16779-201ENST00000612722 7638 ntBASIC14.5□□□□□ -0.09
SHC1P29353 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SHC1P29353 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
SHC1P29353 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHC1P29353 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.49□□□□□ -0.09
SHC1P29353 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.49□□□□□ -0.09
SHC1P29353 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
SHC1P29353 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 AC136621.1-201ENST00000624017 2304 ntBASIC14.49□□□□□ -0.09
SHC1P29353 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
SHC1P29353 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SHC1P29353 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms