Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TPM1P09493 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TPM1P09493 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TPM1P09493 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TPM1P09493 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TPM1P09493 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.46■□□□□ 0.38
TPM1P09493 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TPM1P09493 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
TPM1P09493 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
TPM1P09493 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 ST20-AS1-201ENST00000560255 4223 ntBASIC17.45■□□□□ 0.38
TPM1P09493 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM1P09493 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TPM1P09493 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TPM1P09493 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.45■□□□□ 0.38
TPM1P09493 AC092910.1-201ENST00000482027 1129 ntBASIC17.45■□□□□ 0.38
TPM1P09493 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM1P09493 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM1P09493 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.45■□□□□ 0.38
TPM1P09493 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.45■□□□□ 0.38
TPM1P09493 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM1P09493 AC007064.4-201ENST00000637740 555 ntBASIC17.45■□□□□ 0.38
TPM1P09493 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM1P09493 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM1P09493 CICP23-201ENST00000605013 2741 ntBASIC17.45■□□□□ 0.38
TPM1P09493 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM1P09493 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
TPM1P09493 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
TPM1P09493 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM1P09493 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TPM1P09493 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM1P09493 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM1P09493 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 CICP4-201ENST00000447359 2812 ntBASIC17.44■□□□□ 0.38
TPM1P09493 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM1P09493 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 AC007191.1-201ENST00000623179 2995 ntBASIC17.44■□□□□ 0.38
TPM1P09493 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TPM1P09493 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.44■□□□□ 0.38
TPM1P09493 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 GPX1P2-201ENST00000429271 606 ntBASIC17.44■□□□□ 0.38
TPM1P09493 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.44■□□□□ 0.38
TPM1P09493 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM1P09493 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TPM1P09493 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 AC104581.4-201ENST00000623126 3052 ntBASIC17.44■□□□□ 0.38
TPM1P09493 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.44■□□□□ 0.38
TPM1P09493 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM1P09493 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TPM1P09493 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM1P09493 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
TPM1P09493 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms