Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
ZNF253O75346 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 AC108073.2-201ENST00000464002 357 ntBASIC12.37□□□□□ -0.43
ZNF253O75346 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF253O75346 RNPS1P1-201ENST00000507437 918 ntBASIC12.37□□□□□ -0.43
ZNF253O75346 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.37□□□□□ -0.43
ZNF253O75346 AP002469.2-201ENST00000531724 424 ntBASIC12.37□□□□□ -0.43
ZNF253O75346 AC109635.5-201ENST00000533593 962 ntBASIC12.37□□□□□ -0.43
ZNF253O75346 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
ZNF253O75346 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.37□□□□□ -0.43
ZNF253O75346 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.37□□□□□ -0.43
ZNF253O75346 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.37□□□□□ -0.43
ZNF253O75346 OR7E47P-204ENST00000575924 449 ntBASIC12.37□□□□□ -0.43
ZNF253O75346 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.37□□□□□ -0.43
ZNF253O75346 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF253O75346 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF253O75346 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF253O75346 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 AC005840.4-201ENST00000541242 2494 ntBASIC12.37□□□□□ -0.43
ZNF253O75346 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ZNF253O75346 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ZNF253O75346 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF253O75346 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
ZNF253O75346 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF253O75346 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ZNF253O75346 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
ZNF253O75346 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF253O75346 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF253O75346 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF253O75346 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ZNF253O75346 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.36□□□□□ -0.43
ZNF253O75346 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF253O75346 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF253O75346 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.36□□□□□ -0.43
ZNF253O75346 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF253O75346 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.36□□□□□ -0.43
ZNF253O75346 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF253O75346 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF253O75346 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ZNF253O75346 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.36□□□□□ -0.43
ZNF253O75346 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF253O75346 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.36□□□□□ -0.43
ZNF253O75346 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF253O75346 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ZNF253O75346 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 CICP23-201ENST00000605013 2741 ntBASIC12.36□□□□□ -0.43
ZNF253O75346 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ZNF253O75346 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF253O75346 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms