Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCC4O15439 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCC4O15439 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.9■□□□□ 0.78
ABCC4O15439 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCC4O15439 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ABCC4O15439 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCC4O15439 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.9■□□□□ 0.78
ABCC4O15439 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCC4O15439 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCC4O15439 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCC4O15439 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.9■□□□□ 0.78
ABCC4O15439 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCC4O15439 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
ABCC4O15439 AC010319.3-201ENST00000597028 470 ntBASIC19.9■□□□□ 0.78
ABCC4O15439 AL158212.4-201ENST00000624062 1286 ntBASIC19.9■□□□□ 0.78
ABCC4O15439 COX11-210ENST00000639671 696 ntBASIC19.9■□□□□ 0.78
ABCC4O15439 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCC4O15439 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCC4O15439 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCC4O15439 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCC4O15439 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCC4O15439 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCC4O15439 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCC4O15439 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCC4O15439 AC126177.1-201ENST00000547829 2218 ntBASIC19.89■□□□□ 0.78
ABCC4O15439 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
ABCC4O15439 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.89■□□□□ 0.78
ABCC4O15439 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ABCC4O15439 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.89■□□□□ 0.78
ABCC4O15439 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
ABCC4O15439 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.89■□□□□ 0.78
ABCC4O15439 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 AC087481.3-201ENST00000602886 1894 ntBASIC19.89■□□□□ 0.77
ABCC4O15439 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.89■□□□□ 0.77
ABCC4O15439 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.89■□□□□ 0.77
ABCC4O15439 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.89■□□□□ 0.77
ABCC4O15439 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.89■□□□□ 0.77
ABCC4O15439 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.89■□□□□ 0.77
ABCC4O15439 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.89■□□□□ 0.77
ABCC4O15439 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
ABCC4O15439 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ABCC4O15439 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ABCC4O15439 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.89■□□□□ 0.77
ABCC4O15439 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ABCC4O15439 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.89■□□□□ 0.77
ABCC4O15439 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.89■□□□□ 0.77
ABCC4O15439 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCC4O15439 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 AC104640.1-201ENST00000562617 2109 ntBASIC19.88■□□□□ 0.77
ABCC4O15439 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 AC073347.1-201ENST00000421633 2643 ntBASIC19.88■□□□□ 0.77
ABCC4O15439 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ABCC4O15439 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
ABCC4O15439 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ABCC4O15439 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.88■□□□□ 0.77
ABCC4O15439 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
ABCC4O15439 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.88■□□□□ 0.77
ABCC4O15439 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.88■□□□□ 0.77
ABCC4O15439 USP32P1-208ENST00000506594 1164 ntBASIC19.88■□□□□ 0.77
ABCC4O15439 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ABCC4O15439 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.88■□□□□ 0.77
ABCC4O15439 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ABCC4O15439 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.88■□□□□ 0.77
ABCC4O15439 AC015936.2-201ENST00000593177 259 ntBASIC19.88■□□□□ 0.77
ABCC4O15439 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ABCC4O15439 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCC4O15439 AL121723.1-201ENST00000445194 1519 ntBASIC19.88■□□□□ 0.77
ABCC4O15439 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ABCC4O15439 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCC4O15439 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ABCC4O15439 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCC4O15439 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCC4O15439 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ABCC4O15439 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms