Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 RN7SL204P-201ENST00000582831 262 ntBASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC025181.2-201ENST00000606994 802 ntBASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC006486.2-201ENST00000624246 2199 ntBASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV5-4A0A0C4DH59 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC138035.3-201ENST00000622706 2791 ntBASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 SLC7A15P-201ENST00000424028 1363 ntBASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 HMGN1P19-201ENST00000436976 333 ntBASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 GAPDHP40-201ENST00000505218 1006 ntBASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-4A0A0C4DH59 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms