Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNRF3Q9ULT6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ZNRF3Q9ULT6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNRF3Q9ULT6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ZNRF3Q9ULT6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 AC092171.3-201ENST00000610122 2651 ntBASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 AL139094.1-201ENST00000405549 1188 ntBASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 AC128714.1-201ENST00000637035 887 ntBASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 TUBBP5-203ENST00000508529 1334 ntBASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNRF3Q9ULT6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 AL008707.1-201ENST00000422498 534 ntBASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 RN7SL713P-201ENST00000582127 302 ntBASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNRF3Q9ULT6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 AC253536.4-201ENST00000440539 267 ntBASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 MAGEA5-201ENST00000446757 942 ntBASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 U62317.3-201ENST00000608319 855 ntBASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms