Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXD3Q9UJU5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 AZGP1P1-201ENST00000411909 902 ntBASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 MYCLP2-201ENST00000449268 967 ntBASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXD3Q9UJU5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 AC123567.1-201ENST00000548294 1261 ntBASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 HNRNPUP1-201ENST00000554987 333 ntBASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 IGHV3-72-202ENST00000621503 303 ntBASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FOXD3Q9UJU5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms