Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 AL121723.1-201ENST00000445194 1519 ntBASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LRIT1Q9P2V4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 AC119751.2-201ENST00000504529 210 ntBASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 AL596087.1-201ENST00000400979 1969 ntBASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRIT1Q9P2V4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
LRIT1Q9P2V4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
LRIT1Q9P2V4 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 BCRP2-202ENST00000447763 634 ntBASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 BCRP6-201ENST00000510112 632 ntBASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 BCRP7-201ENST00000511549 544 ntBASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 AC000095.1-201ENST00000603208 874 ntBASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRIT1Q9P2V4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms