Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AZGP1P1-201ENST00000411909 902 ntBASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 HIST3H2BA-201ENST00000436555 524 ntBASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 AC093004.1-201ENST00000508850 424 ntBASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 TIMM17BP1-201ENST00000545713 516 ntBASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 MTHFR-217ENST00000641820 1569 ntBASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 AC007541.1-201ENST00000570282 1469 ntBASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 CYP2T1P-202ENST00000641596 2535 ntBASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AC015922.1-201ENST00000421102 1152 ntBASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 SRD5A3P1-201ENST00000603021 949 ntBASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AL358472.5-202ENST00000641448 1267 ntBASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AL513523.2-202ENST00000427283 2040 ntBASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 AL596087.1-201ENST00000400979 1969 ntBASIC13.21□□□□□ -0.29
SSBP3Q9BWW4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.21□□□□□ -0.3
SSBP3Q9BWW4 AL391825.1-201ENST00000457671 1364 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 DBET-201ENST00000630918 3363 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 REXO1L1P-202ENST00000608646 1974 ntBASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP3Q9BWW4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms