Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 AC140878.1-201ENST00000565277 250 ntBASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 AP001160.2-201ENST00000596071 487 ntBASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 AL138828.2-201ENST00000615812 383 ntBASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 SPDYE12P-201ENST00000618416 771 ntBASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 AL691403.2-201ENST00000618460 490 ntBASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 AC023511.2-201ENST00000618803 211 ntBASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 TOMM22P5-201ENST00000416399 439 ntBASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 RPL13P2-201ENST00000440687 659 ntBASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 KLF2P3-201ENST00000451977 1087 ntBASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 ZNF890P-202ENST00000530367 1156 ntBASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDLIM5Q96HC4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 AL133267.1-201ENST00000398220 340 ntBASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 AC067863.1-201ENST00000494933 530 ntBASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 AC010336.2-201ENST00000564226 506 ntBASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 AC004449.1-201ENST00000564240 433 ntBASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 AC073592.8-201ENST00000624126 511 ntBASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 LINC02228-204ENST00000642115 2962 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms