Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 TPRX2P-201ENST00000535362 881 ntBASIC15.3■□□□□ 0.04
RNF31Q96EP0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 AC007326.2-201ENST00000624224 7579 ntBASIC15.29■□□□□ 0.04
RNF31Q96EP0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 CYP4F24P-201ENST00000586049 1580 ntBASIC15.29■□□□□ 0.04
RNF31Q96EP0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 OR8S1-201ENST00000310194 1080 ntBASIC15.29■□□□□ 0.04
RNF31Q96EP0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 TMEM14DP-201ENST00000422205 345 ntBASIC15.29■□□□□ 0.04
RNF31Q96EP0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 AL139010.1-201ENST00000454878 894 ntBASIC15.29■□□□□ 0.04
RNF31Q96EP0 RN7SL752P-201ENST00000463779 287 ntBASIC15.29■□□□□ 0.04
RNF31Q96EP0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 SRD5A3P1-201ENST00000603021 949 ntBASIC15.29■□□□□ 0.04
RNF31Q96EP0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.29■□□□□ 0.04
RNF31Q96EP0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF31Q96EP0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF31Q96EP0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 U91328.1-201ENST00000437528 223 ntBASIC15.28■□□□□ 0.04
RNF31Q96EP0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 CTBP2P3-201ENST00000585629 1255 ntBASIC15.28■□□□□ 0.04
RNF31Q96EP0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.28■□□□□ 0.04
RNF31Q96EP0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RNF31Q96EP0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF31Q96EP0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms